Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 RN7SKP210-201ENST00000459176 261 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 AC074133.1-201ENST00000515696 183 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-927P-201ENST00000516199 100 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 Y_RNA.706-201ENST00000516933 99 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 AC084851.1-201ENST00000529105 249 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 MRPS18CP4-201ENST00000535821 231 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 AC104581.2-201ENST00000572227 430 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 RPL23AP78-201ENST00000599928 470 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 AC008121.1-201ENST00000603244 268 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 AC099506.2-201ENST00000623074 221 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 AC243829.7-201ENST00000633081 225 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 MIR7153-201ENST00000637758 57 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 AC004925.1-201ENST00000624256 2706 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 AC093010.3-201ENST00000570269 15214 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 MIR208A-201ENST00000362287 71 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-1167P-201ENST00000363227 94 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-629P-201ENST00000384061 103 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-318P-201ENST00000384283 103 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 SNORD78.2-201ENST00000391076 69 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-394P-201ENST00000410735 107 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 RNA5SP120-201ENST00000410900 112 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 AL358453.1-201ENST00000422522 250 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 AC006028.1-201ENST00000438379 402 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 AC009237.7-201ENST00000447357 229 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 SSXP4-201ENST00000451349 245 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 snoU109.2-201ENST00000459316 135 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 AC139453.3-201ENST00000493276 369 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-1219P-201ENST00000516143 112 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 AC093331.1-201ENST00000521474 169 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 AC097372.5-201ENST00000623665 376 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 IGHVIII-44-202ENST00000636235 289 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 AC009812.4-201ENST00000569134 1805 ntBASIC3.49□□□□□ -1.85
CDK5RAP1Q96SZ6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 RNA5SP361-201ENST00000362686 118 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU4-90P-201ENST00000362773 141 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 Y_RNA.233-201ENST00000364407 101 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-1130P-201ENST00000365434 107 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-395P-201ENST00000365662 106 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 Y_RNA.504-201ENST00000384481 104 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 RPL23AP82-202ENST00000427528 469 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 RPL23AP3-201ENST00000453844 468 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 RPS4XP2-201ENST00000458402 793 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 CENPBD1P1-201ENST00000464061 469 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 AC087477.1-201ENST00000465747 340 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 HSPE1P6-201ENST00000479457 291 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 RPL21P9-201ENST00000556149 474 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 TGIF1P1-201ENST00000558095 802 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 H3F3AP1-201ENST00000559984 334 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 MIR5195-201ENST00000583555 115 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 AC060766.3-201ENST00000591442 263 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 AL162424.1-201ENST00000602325 221 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 AC072026.1-201ENST00000605023 201 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 MAPK10-362ENST00000641864 4484 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 AC010733.2-201ENST00000589496 5702 ntBASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.48□□□□□ -1.85
CDK5RAP1Q96SZ6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 RNA5SP197-201ENST00000363357 119 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 SNORA38.1-201ENST00000364172 131 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-336P-201ENST00000364891 107 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 SNORD50B-201ENST00000364995 70 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 Y_RNA.304-201ENST00000365011 112 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 MIR186-201ENST00000384988 86 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 AL033519.2-201ENST00000403958 392 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 AL513331.1-201ENST00000411908 397 ntBASIC3.47□□□□□ -1.85
CDK5RAP1Q96SZ6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 333.6 ms