Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SCARNA24.1-201ENST00000516465 137 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.5□□□□□ -2.17
COL21A1Q96P44 AC119751.7-201ENST00000600494 245 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 Z82243.1-201ENST00000609432 473 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 AL359740.1-201ENST00000624340 592 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 Z69720.2-201ENST00000624755 279 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 U4.7-201ENST00000638126 106 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.5□□□□□ -2.17
COL21A1Q96P44 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
COL21A1Q96P44 U8.3-201ENST00000363321 132 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 RNU4-91P-201ENST00000364778 135 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 MIR454-201ENST00000390180 115 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 SNORA40.3-201ENST00000390964 122 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 RNU2-3P-201ENST00000410144 191 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.49□□□□□ -2.17
COL21A1Q96P44 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.49□□□□□ -2.17
COL21A1Q96P44 AC104850.1-201ENST00000435940 476 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 MTND4P32-201ENST00000437189 1237 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 USP9YP29-201ENST00000445112 563 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 AL360221.1-201ENST00000445989 335 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.49□□□□□ -2.17
COL21A1Q96P44 AL122001.1-201ENST00000457027 370 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 AC022364.2-201ENST00000457963 554 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.49□□□□□ -2.17
COL21A1Q96P44 GMFBP1-201ENST00000467831 427 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.49□□□□□ -2.17
COL21A1Q96P44 Y_RNA.670-201ENST00000516255 105 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 SNORA44.1-201ENST00000517031 108 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 RNA5SP490-201ENST00000517141 136 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 CBX3P4-201ENST00000538909 354 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.49□□□□□ -2.17
COL21A1Q96P44 AC022254.1-201ENST00000567857 235 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 RSL24D1P11-201ENST00000591045 491 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 AC090578.1-201ENST00000604955 591 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 AC018889.1-201ENST00000605372 397 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 AL121992.2-201ENST00000606262 256 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 AL022345.1-201ENST00000607292 135 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 AC093783.1-201ENST00000612976 329 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.49□□□□□ -2.17
COL21A1Q96P44 AC008250.2-201ENST00000615261 205 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 AP001506.1-201ENST00000615444 211 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
COL21A1Q96P44 AL390237.1-201ENST00000404226 1415 ntBASIC1.49□□□□□ -2.17
COL21A1Q96P44 AP000560.1-201ENST00000624150 1937 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL21A1Q96P44 Y_RNA.51-201ENST00000362725 102 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 RNU6-527P-201ENST00000363425 104 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 RNU4-40P-201ENST00000364351 143 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
COL21A1Q96P44 RNU6-45P-201ENST00000384471 107 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 Y_RNA.553-201ENST00000384670 102 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 BTF3L4P2-201ENST00000392798 346 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 MIR1262-201ENST00000408276 93 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 RNU6-248P-201ENST00000410720 107 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 RNU6-195P-201ENST00000411352 109 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.48□□□□□ -2.17
COL21A1Q96P44 AC092473.1-201ENST00000441098 221 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 MTCO1P19-201ENST00000443487 500 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
COL21A1Q96P44 AL033528.1-201ENST00000453780 140 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 AL353752.1-201ENST00000454946 260 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 SNORD42A-201ENST00000459584 64 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 AC087884.1-201ENST00000469738 328 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.48□□□□□ -2.17
COL21A1Q96P44 RPL30P12-201ENST00000474666 353 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 AC010424.1-201ENST00000506336 297 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.48□□□□□ -2.17
COL21A1Q96P44 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.48□□□□□ -2.17
COL21A1Q96P44 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.48□□□□□ -2.17
COL21A1Q96P44 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.48□□□□□ -2.17
COL21A1Q96P44 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.48□□□□□ -2.17
COL21A1Q96P44 MIR3198-2-201ENST00000577868 80 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 AC103987.3-201ENST00000582071 292 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 MIR3941-201ENST00000582572 103 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 MIR3136-201ENST00000583498 78 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 AC098848.2-201ENST00000588023 330 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 VN1R107P-201ENST00000601784 209 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 AC078795.2-201ENST00000602835 1252 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 SEPT7P9-203ENST00000604116 343 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 AL356157.2-201ENST00000605122 111 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 AP000654.2-201ENST00000605633 586 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 AC087752.4-201ENST00000605911 462 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 AC080013.6-201ENST00000606185 215 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 RN7SKP299-201ENST00000606679 301 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 uc_338.5-201ENST00000611839 155 ntBASIC1.48□□□□□ -2.17
COL21A1Q96P44 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
COL21A1Q96P44 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.48□□□□□ -2.17
COL21A1Q96P44 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL21A1Q96P44 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.48□□□□□ -2.17
COL21A1Q96P44 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL21A1Q96P44 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
COL21A1Q96P44 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
COL21A1Q96P44 CBX3P1-201ENST00000325243 554 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 RNU6-1287P-201ENST00000362914 107 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 RNU6-457P-201ENST00000363999 107 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 RNU6-944P-201ENST00000364023 107 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 RNY4P34-201ENST00000364779 95 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 SNORA75-201ENST00000384158 137 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 Y_RNA.480-201ENST00000384364 102 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms