Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU4-48P-201ENST00000365559 182 ntBASIC1.64□□□□□ -2.15
RPRD1AQ96P16 RNY3P10-201ENST00000384764 102 ntBASIC1.64□□□□□ -2.15
RPRD1AQ96P16 RNU6-1245P-201ENST00000411130 106 ntBASIC1.64□□□□□ -2.15
RPRD1AQ96P16 MTCO2P34-201ENST00000421994 607 ntBASIC1.64□□□□□ -2.15
RPRD1AQ96P16 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.64□□□□□ -2.15
RPRD1AQ96P16 RNU1-98P-201ENST00000458992 160 ntBASIC1.64□□□□□ -2.15
RPRD1AQ96P16 SNRPGP7-201ENST00000469016 106 ntBASIC1.64□□□□□ -2.15
RPRD1AQ96P16 AC145146.1-201ENST00000496370 254 ntBASIC1.64□□□□□ -2.15
RPRD1AQ96P16 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.64□□□□□ -2.15
RPRD1AQ96P16 MTND3P5-201ENST00000512798 333 ntBASIC1.64□□□□□ -2.15
RPRD1AQ96P16 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.64□□□□□ -2.15
RPRD1AQ96P16 COPS8P3-201ENST00000526024 482 ntBASIC1.64□□□□□ -2.15
RPRD1AQ96P16 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.64□□□□□ -2.15
RPRD1AQ96P16 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.64□□□□□ -2.15
RPRD1AQ96P16 AP000654.2-201ENST00000605633 586 ntBASIC1.64□□□□□ -2.15
RPRD1AQ96P16 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.64□□□□□ -2.15
RPRD1AQ96P16 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RPRD1AQ96P16 AC022418.1-201ENST00000624118 445 ntBASIC1.64□□□□□ -2.15
RPRD1AQ96P16 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
RPRD1AQ96P16 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
RPRD1AQ96P16 RNU6-23P-201ENST00000363283 107 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 RNU6-43P-201ENST00000384302 107 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 RNU6-456P-201ENST00000384493 107 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 RNU6-1127P-201ENST00000384580 107 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 SNORA48.1-201ENST00000390879 135 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 SNORA16.2-201ENST00000390991 127 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
RPRD1AQ96P16 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.63□□□□□ -2.15
RPRD1AQ96P16 AC133104.1-201ENST00000429100 218 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 MTND1P18-201ENST00000448191 573 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 AC013470.1-201ENST00000453438 462 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 RNA5SP269-201ENST00000459032 137 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 AC022447.4-201ENST00000504053 364 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 RNU2-69P-201ENST00000516061 100 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 RNVU1-2-201ENST00000516326 135 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.63□□□□□ -2.15
RPRD1AQ96P16 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.63□□□□□ -2.15
RPRD1AQ96P16 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.63□□□□□ -2.15
RPRD1AQ96P16 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.63□□□□□ -2.15
RPRD1AQ96P16 SNORD53B-201ENST00000577887 78 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 BNIP3P16-201ENST00000589779 534 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 BX248123.2-201ENST00000606318 124 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 AL590240.4-201ENST00000616908 390 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 AC091304.6-201ENST00000619761 202 ntBASIC1.63□□□□□ -2.15
RPRD1AQ96P16 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RPRD1AQ96P16 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.63□□□□□ -2.15
RPRD1AQ96P16 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.63□□□□□ -2.15
RPRD1AQ96P16 RNA5SP493-201ENST00000364115 91 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 SNORD114-6-201ENST00000364393 72 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 RNU6-393P-201ENST00000384475 107 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 RNU6-160P-201ENST00000384591 107 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 SNORD70.1-201ENST00000391007 85 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 SNORA67.5-201ENST00000391036 107 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.62□□□□□ -2.15
RPRD1AQ96P16 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RPRD1AQ96P16 AC010975.2-201ENST00000427781 588 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 PRPS1P1-201ENST00000445305 876 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 AL360221.1-201ENST00000445989 335 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 AL035666.1-201ENST00000446195 348 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 SNORA31.16-201ENST00000516773 139 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 AC109479.2-201ENST00000517842 174 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 LRRC34P1-201ENST00000542742 915 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.62□□□□□ -2.15
RPRD1AQ96P16 MIR3169-201ENST00000578032 83 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 AC107304.1-201ENST00000604229 296 ntBASIC1.62□□□□□ -2.15
RPRD1AQ96P16 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RPRD1AQ96P16 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
RPRD1AQ96P16 RNU6-181P-201ENST00000363225 107 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 Y_RNA.169-201ENST00000363745 96 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 RNU6-457P-201ENST00000363999 107 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 Y_RNA.201-201ENST00000364052 96 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 RNU6-1141P-201ENST00000364520 107 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 RNU4-91P-201ENST00000364778 135 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 SNORA17.3-201ENST00000391159 129 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 RNA5SP100-201ENST00000410903 110 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 RNA5SP59-201ENST00000410922 110 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.61□□□□□ -2.15
RPRD1AQ96P16 AL117339.3-201ENST00000418733 162 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 AL513185.2-201ENST00000425543 193 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.61□□□□□ -2.15
RPRD1AQ96P16 AL031667.1-201ENST00000440222 725 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 LRRC34P2-201ENST00000514850 553 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 RNU6-445P-201ENST00000516949 107 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 RNA5SP490-201ENST00000517141 136 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 SNORA25.17-201ENST00000517184 124 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.61□□□□□ -2.15
RPRD1AQ96P16 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.61□□□□□ -2.15
RPRD1AQ96P16 AC110760.3-201ENST00000598794 467 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 AC002044.1-201ENST00000606707 158 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 AC068944.2-201ENST00000610373 403 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 AC091931.1-201ENST00000623488 728 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.61□□□□□ -2.15
RPRD1AQ96P16 AC008993.2-201ENST00000631744 806 ntBASIC1.61□□□□□ -2.15
RPRD1AQ96P16 AP000560.1-201ENST00000624150 1937 ntBASIC1.6□□□□□ -2.15
RPRD1AQ96P16 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
RPRD1AQ96P16 CBX3P1-201ENST00000325243 554 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms