Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC116337.1-201ENST00000509680 687 ntBASIC2□□□□□ -2.09
ZNF560Q96MR9 AC009646.1-201ENST00000510455 318 ntBASIC2□□□□□ -2.09
ZNF560Q96MR9 AC091133.4-201ENST00000511142 308 ntBASIC2□□□□□ -2.09
ZNF560Q96MR9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2□□□□□ -2.09
ZNF560Q96MR9 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2□□□□□ -2.09
ZNF560Q96MR9 AC007684.1-201ENST00000609671 477 ntBASIC2□□□□□ -2.09
ZNF560Q96MR9 U2.17-201ENST00000611454 95 ntBASIC2□□□□□ -2.09
ZNF560Q96MR9 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
ZNF560Q96MR9 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2□□□□□ -2.09
ZNF560Q96MR9 AC022079.1-201ENST00000621546 602 ntBASIC2□□□□□ -2.09
ZNF560Q96MR9 AC241585.2-209ENST00000638217 143 ntBASIC2□□□□□ -2.09
ZNF560Q96MR9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
ZNF560Q96MR9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2□□□□□ -2.09
ZNF560Q96MR9 AC009487.4-201ENST00000624969 3585 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ZNF560Q96MR9 Y_RNA.296-201ENST00000364930 108 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 RNU6-142P-201ENST00000384019 107 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 RNU6-692P-201ENST00000384496 107 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 RNU6-1158P-201ENST00000391167 107 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 AL030996.1-201ENST00000411430 235 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 AC078809.1-201ENST00000427601 140 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 AC010975.2-201ENST00000427781 588 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.99□□□□□ -2.09
ZNF560Q96MR9 MTCO2P16-201ENST00000436962 677 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.99□□□□□ -2.09
ZNF560Q96MR9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.99□□□□□ -2.09
ZNF560Q96MR9 MRPS17P9-201ENST00000511924 393 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 AC107393.1-201ENST00000512403 346 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 RNU6-965P-201ENST00000516721 96 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 AC007375.1-201ENST00000554513 578 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 ANP32BP3-201ENST00000559213 706 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 AC004223.2-201ENST00000590309 544 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 AC011494.1-201ENST00000596454 237 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 AL096840.1-201ENST00000603287 93 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 AC012507.3-201ENST00000603556 477 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 AL034555.1-201ENST00000604816 211 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 RN7SKP299-201ENST00000606679 301 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 AC104073.3-201ENST00000610942 955 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 AL354950.2-201ENST00000617939 290 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 DUXAP9-208ENST00000622815 614 ntBASIC1.99□□□□□ -2.09
ZNF560Q96MR9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ZNF560Q96MR9 Y_RNA.1-201ENST00000352915 104 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 RNU4-15P-201ENST00000362613 141 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ZNF560Q96MR9 SNORD14D-201ENST00000384390 87 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 RNA5SP465-201ENST00000391195 109 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 SNORA26.9-201ENST00000391322 122 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AC068050.1-201ENST00000394891 380 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 RN7SKP61-201ENST00000410642 295 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AL158823.1-201ENST00000418441 478 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.98□□□□□ -2.09
ZNF560Q96MR9 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.98□□□□□ -2.09
ZNF560Q96MR9 SNAP23P1-201ENST00000433229 246 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AC244670.1-201ENST00000436879 112 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.98□□□□□ -2.09
ZNF560Q96MR9 MTND2P29-201ENST00000438595 412 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AL353689.1-201ENST00000438895 199 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AC003989.2-201ENST00000440224 169 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.98□□□□□ -2.09
ZNF560Q96MR9 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.98□□□□□ -2.09
ZNF560Q96MR9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 RNU2-44P-201ENST00000516795 194 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 MTND4P7-201ENST00000523876 130 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AP003034.1-201ENST00000534621 422 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AK6P1-201ENST00000540219 478 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.98□□□□□ -2.09
ZNF560Q96MR9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AC087683.1-201ENST00000591187 441 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AC010620.1-201ENST00000601088 1102 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AC005034.5-201ENST00000604219 466 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AC107304.1-201ENST00000604229 296 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 SNORD98-201ENST00000636377 67 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ZNF560Q96MR9 AL354685.2-201ENST00000448218 1447 ntBASIC1.98□□□□□ -2.09
ZNF560Q96MR9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
ZNF560Q96MR9 RNA5SP276-201ENST00000362580 94 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 Y_RNA.255-201ENST00000364581 97 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 SNORD32A-201ENST00000364805 84 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 Y_RNA.359-201ENST00000365498 102 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 SNORA40.18-201ENST00000391200 128 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 MIR1294-201ENST00000408503 142 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 MIR1283-2-201ENST00000408621 87 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 AL353193.1-201ENST00000421444 268 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.97□□□□□ -2.09
ZNF560Q96MR9 VN1R108P-201ENST00000431580 830 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.97□□□□□ -2.09
ZNF560Q96MR9 AL031274.1-201ENST00000450334 232 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 MTCO2P18-201ENST00000457151 658 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.97□□□□□ -2.09
ZNF560Q96MR9 TRAV32-201ENST00000553993 340 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.97□□□□□ -2.09
ZNF560Q96MR9 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.97□□□□□ -2.09
ZNF560Q96MR9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.97□□□□□ -2.09
ZNF560Q96MR9 DEFB122-202ENST00000569013 197 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 MIR5583-1-201ENST00000580941 59 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 MIR3935-201ENST00000583472 104 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 AC017083.3-201ENST00000609955 700 ntBASIC1.97□□□□□ -2.09
ZNF560Q96MR9 uc_338.34-201ENST00000617467 174 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms