Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 MIR1248-201ENST00000629190 106 ntBASIC1.6□□□□□ -2.15
USP47Q96K76 RNU1-58P-201ENST00000362413 163 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 RNY4P34-201ENST00000364779 95 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 SNORD115-7-201ENST00000365306 82 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 MIR222-201ENST00000384992 110 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 RNA5SP501-201ENST00000410990 112 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 RNU6-387P-201ENST00000411331 105 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 RPS15AP10-201ENST00000432472 382 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 AC007969.2-201ENST00000441891 191 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.59□□□□□ -2.15
USP47Q96K76 AC093852.1-201ENST00000503587 266 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.59□□□□□ -2.15
USP47Q96K76 AC093259.1-201ENST00000509755 300 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 AC009646.1-201ENST00000510455 318 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 RN7SKP265-201ENST00000516448 223 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.59□□□□□ -2.15
USP47Q96K76 AC018630.3-201ENST00000542637 96 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.59□□□□□ -2.15
USP47Q96K76 MIR4285-201ENST00000581001 85 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.59□□□□□ -2.15
USP47Q96K76 AL136363.2-201ENST00000604173 851 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 U1.36-201ENST00000620684 176 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 AC131159.1-201ENST00000621854 213 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 AC097372.5-201ENST00000623665 376 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 MTND4P4-201ENST00000439033 1366 ntBASIC1.59□□□□□ -2.15
USP47Q96K76 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 MIR548J-201ENST00000408833 112 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 RNU2-3P-201ENST00000410144 191 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 RNU6-607P-201ENST00000411283 108 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 Z99497.1-201ENST00000421282 135 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.59□□□□□ -2.16
USP47Q96K76 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.59□□□□□ -2.16
USP47Q96K76 HSPE1P21-201ENST00000438283 308 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.59□□□□□ -2.16
USP47Q96K76 KATNBL1P3-201ENST00000443475 909 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 MTND2P33-201ENST00000506452 1031 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 AC005178.1-201ENST00000508392 440 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 RNU6-415P-201ENST00000516252 97 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 Vault.3-201ENST00000516676 95 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 HSBP1P1-201ENST00000555205 166 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 AC090616.2-202ENST00000584248 222 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 AL050343.2-201ENST00000607338 280 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.59□□□□□ -2.16
USP47Q96K76 RMST_4.1-201ENST00000616886 107 ntBASIC1.59□□□□□ -2.16
USP47Q96K76 RNU6-342P-201ENST00000384521 104 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
USP47Q96K76 OR6C66P-201ENST00000414917 930 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 AL591704.2-201ENST00000421658 181 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 UBE2V1P4-201ENST00000425374 344 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 AC073614.1-201ENST00000438690 650 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 RNU7-125P-201ENST00000458760 62 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.58□□□□□ -2.16
USP47Q96K76 AC074344.1-201ENST00000512823 224 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 RNU6-1129P-201ENST00000515964 104 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 MIR449C-201ENST00000516047 92 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 AC090572.1-201ENST00000519251 160 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 AL356057.1-201ENST00000533798 831 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 AC087883.1-201ENST00000551882 391 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.58□□□□□ -2.16
USP47Q96K76 AC137800.2-201ENST00000574375 120 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.58□□□□□ -2.16
USP47Q96K76 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.58□□□□□ -2.16
USP47Q96K76 AC090578.1-201ENST00000604955 591 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 U6.114-201ENST00000636407 96 ntBASIC1.58□□□□□ -2.16
USP47Q96K76 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
USP47Q96K76 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
USP47Q96K76 SNORA72.3-201ENST00000365074 132 ntBASIC1.57□□□□□ -2.16
USP47Q96K76 RNU6-45P-201ENST00000384471 107 ntBASIC1.57□□□□□ -2.16
USP47Q96K76 MIR598-201ENST00000384868 97 ntBASIC1.57□□□□□ -2.16
USP47Q96K76 RPS3AP3-201ENST00000411933 242 ntBASIC1.57□□□□□ -2.16
USP47Q96K76 CYCSP33-201ENST00000414485 327 ntBASIC1.57□□□□□ -2.16
USP47Q96K76 EIF4EP2-201ENST00000422816 654 ntBASIC1.57□□□□□ -2.16
USP47Q96K76 CBX3P6-201ENST00000430257 527 ntBASIC1.57□□□□□ -2.16
USP47Q96K76 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.57□□□□□ -2.16
USP47Q96K76 MTND4LP16-201ENST00000440828 295 ntBASIC1.57□□□□□ -2.16
USP47Q96K76 MTND1P30-201ENST00000441241 901 ntBASIC1.57□□□□□ -2.16
USP47Q96K76 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.57□□□□□ -2.16
USP47Q96K76 AC092991.1-201ENST00000477176 376 ntBASIC1.57□□□□□ -2.16
USP47Q96K76 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.57□□□□□ -2.16
USP47Q96K76 RNU5F-2P-201ENST00000516066 82 ntBASIC1.57□□□□□ -2.16
USP47Q96K76 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.57□□□□□ -2.16
USP47Q96K76 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.57□□□□□ -2.16
USP47Q96K76 MIR4713-201ENST00000582691 75 ntBASIC1.57□□□□□ -2.16
USP47Q96K76 AC091135.1-201ENST00000585943 307 ntBASIC1.57□□□□□ -2.16
USP47Q96K76 AC022022.2-201ENST00000602989 360 ntBASIC1.57□□□□□ -2.16
USP47Q96K76 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
USP47Q96K76 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
USP47Q96K76 RNU6-1287P-201ENST00000362914 107 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 RNU6-1222P-201ENST00000384615 107 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 RNU6-1060P-201ENST00000384664 107 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 MIR1285-1-201ENST00000408593 84 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 RNU6-195P-201ENST00000411352 109 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.56□□□□□ -2.16
USP47Q96K76 HIGD1AP15-201ENST00000416198 280 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 AL590556.1-201ENST00000423231 483 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USP47Q96K76 MTND2P4-201ENST00000445034 1004 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.56□□□□□ -2.16
USP47Q96K76 MTCYBP1-201ENST00000454315 1119 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms