Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC136Q96JN2 RNU6-944P-201ENST00000364023 107 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 Y_RNA.212-201ENST00000364177 102 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 RNA5SP240-201ENST00000365355 128 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 RNU6-128P-201ENST00000383976 107 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 SNORA36A-201ENST00000384221 132 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 Y_RNA.504-201ENST00000384481 104 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CCDC136Q96JN2 AL030996.1-201ENST00000411430 235 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC136Q96JN2 AC105272.1-201ENST00000438604 198 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 HMGB1P35-201ENST00000503360 598 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 AC096745.1-201ENST00000509945 370 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 AC115990.1-201ENST00000526957 301 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 CYCSP26-201ENST00000534107 320 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 GTF3AP2-201ENST00000557014 266 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 AL034555.1-201ENST00000604816 211 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 AC008121.3-201ENST00000618726 433 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 AC009033.1-201ENST00000624279 431 ntBASIC3.16□□□□□ -1.9
CCDC136Q96JN2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC136Q96JN2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC136Q96JN2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC136Q96JN2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC136Q96JN2 MIR21-201ENST00000362134 72 ntBASIC3.15□□□□□ -1.91
CCDC136Q96JN2 RNA5SP456-201ENST00000364002 114 ntBASIC3.15□□□□□ -1.91
CCDC136Q96JN2 RNU6-95P-201ENST00000384697 107 ntBASIC3.15□□□□□ -1.91
CCDC136Q96JN2 MIR9-1-201ENST00000385198 89 ntBASIC3.15□□□□□ -1.91
CCDC136Q96JN2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CCDC136Q96JN2 AL049873.1-201ENST00000480540 376 ntBASIC3.15□□□□□ -1.91
CCDC136Q96JN2 RNU4-49P-201ENST00000516080 140 ntBASIC3.15□□□□□ -1.91
CCDC136Q96JN2 RNU6-358P-201ENST00000516564 75 ntBASIC3.15□□□□□ -1.91
CCDC136Q96JN2 SNORA48.11-201ENST00000517015 89 ntBASIC3.15□□□□□ -1.91
CCDC136Q96JN2 AF235103.2-201ENST00000525753 346 ntBASIC3.15□□□□□ -1.91
CCDC136Q96JN2 ELOCP29-201ENST00000588193 334 ntBASIC3.15□□□□□ -1.91
CCDC136Q96JN2 AC018638.8-201ENST00000588755 281 ntBASIC3.15□□□□□ -1.91
CCDC136Q96JN2 SNORA43.4-201ENST00000629559 138 ntBASIC3.15□□□□□ -1.91
CCDC136Q96JN2 AC009541.1-201ENST00000438279 2662 ntBASIC3.15□□□□□ -1.91
CCDC136Q96JN2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC136Q96JN2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC136Q96JN2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC136Q96JN2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CCDC136Q96JN2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC136Q96JN2 Y_RNA.135-201ENST00000363439 95 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 Y_RNA.151-201ENST00000363566 112 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC136Q96JN2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC136Q96JN2 AL356776.1-201ENST00000406574 447 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 MTND1P2-201ENST00000430604 821 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 IFNA11P-201ENST00000446352 526 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC136Q96JN2 MTND1P11-201ENST00000456661 876 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 U8.21-201ENST00000459536 136 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC136Q96JN2 MTCO1P29-201ENST00000496868 288 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 RNU6-864P-201ENST00000516256 108 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 AP000889.2-201ENST00000532684 490 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 AC007375.1-201ENST00000554513 578 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC136Q96JN2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC136Q96JN2 AC023043.2-201ENST00000589678 1026 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 AC078899.2-201ENST00000595282 212 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 AL078605.1-201ENST00000603529 500 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 BNIP3P10-201ENST00000605360 577 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 SNORD14A-201ENST00000606526 91 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 AC093913.1-201ENST00000614178 329 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 AC009248.2-201ENST00000619826 254 ntBASIC3.14□□□□□ -1.91
CCDC136Q96JN2 RNU6-562P-201ENST00000362731 107 ntBASIC3.13□□□□□ -1.91
CCDC136Q96JN2 RNU6-227P-201ENST00000362865 103 ntBASIC3.13□□□□□ -1.91
CCDC136Q96JN2 AL355497.1-201ENST00000406262 551 ntBASIC3.13□□□□□ -1.91
CCDC136Q96JN2 RN7SKP61-201ENST00000410642 295 ntBASIC3.13□□□□□ -1.91
CCDC136Q96JN2 HMGB3P2-201ENST00000411913 584 ntBASIC3.13□□□□□ -1.91
CCDC136Q96JN2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC136Q96JN2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC136Q96JN2 AL513328.1-201ENST00000446460 224 ntBASIC3.13□□□□□ -1.91
CCDC136Q96JN2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC136Q96JN2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC136Q96JN2 AC079804.2-201ENST00000490376 200 ntBASIC3.13□□□□□ -1.91
CCDC136Q96JN2 AC018710.1-201ENST00000506509 158 ntBASIC3.13□□□□□ -1.91
CCDC136Q96JN2 RNU6-1088P-201ENST00000516850 104 ntBASIC3.13□□□□□ -1.91
CCDC136Q96JN2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC136Q96JN2 AC078795.3-201ENST00000602913 472 ntBASIC3.13□□□□□ -1.91
CCDC136Q96JN2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC136Q96JN2 MIR3976-201ENST00000606807 139 ntBASIC3.13□□□□□ -1.91
CCDC136Q96JN2 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC136Q96JN2 AL450472.1-202ENST00000637286 180 ntBASIC3.13□□□□□ -1.91
CCDC136Q96JN2 RNU4-15P-201ENST00000362613 141 ntBASIC3.12□□□□□ -1.91
CCDC136Q96JN2 SNORA41-201ENST00000384675 132 ntBASIC3.12□□□□□ -1.91
CCDC136Q96JN2 MIR521-1-201ENST00000384902 87 ntBASIC3.12□□□□□ -1.91
CCDC136Q96JN2 BTF3L4P2-201ENST00000392798 346 ntBASIC3.12□□□□□ -1.91
CCDC136Q96JN2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC136Q96JN2 AL133396.1-201ENST00000432048 687 ntBASIC3.12□□□□□ -1.91
CCDC136Q96JN2 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC136Q96JN2 RPS3P1-201ENST00000456781 192 ntBASIC3.12□□□□□ -1.91
CCDC136Q96JN2 AC130509.1-201ENST00000464158 433 ntBASIC3.12□□□□□ -1.91
CCDC136Q96JN2 AC018868.1-201ENST00000491307 315 ntBASIC3.12□□□□□ -1.91
CCDC136Q96JN2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.12□□□□□ -1.91
CCDC136Q96JN2 AC087241.2-201ENST00000535801 324 ntBASIC3.12□□□□□ -1.91
CCDC136Q96JN2 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC136Q96JN2 U4atac.1-201ENST00000618345 95 ntBASIC3.12□□□□□ -1.91
CCDC136Q96JN2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms