Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 HMGN2P10-201ENST00000448085 265 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.63□□□□□ -1.83
RTF1Q92541 SNORD109B-201ENST00000458961 67 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 SNORD109A-201ENST00000459128 67 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 RPL23AP49-201ENST00000492925 468 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 AC021146.2-201ENST00000504736 556 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 RNU7-4P-201ENST00000516961 62 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.63□□□□□ -1.83
RTF1Q92541 MIR5701-3-201ENST00000578890 82 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 MIR4672-201ENST00000583126 81 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 MIR5701-1-201ENST00000585138 82 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 ZNF861P-201ENST00000588126 639 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 MIR5701-2-201ENST00000615634 82 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 HMGB1P24-202ENST00000615653 685 ntBASIC3.63□□□□□ -1.83
RTF1Q92541 AC008264.2-201ENST00000610193 3731 ntBASIC3.62□□□□□ -1.83
RTF1Q92541 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RTF1Q92541 RNU6-527P-201ENST00000363425 104 ntBASIC3.62□□□□□ -1.83
RTF1Q92541 Y_RNA.144-201ENST00000363521 113 ntBASIC3.62□□□□□ -1.83
RTF1Q92541 Y_RNA.314-201ENST00000365114 102 ntBASIC3.62□□□□□ -1.83
RTF1Q92541 MIR9-1-201ENST00000385198 89 ntBASIC3.62□□□□□ -1.83
RTF1Q92541 AL356057.3-201ENST00000402607 340 ntBASIC3.62□□□□□ -1.83
RTF1Q92541 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.62□□□□□ -1.83
RTF1Q92541 AC108938.1-201ENST00000451204 136 ntBASIC3.62□□□□□ -1.83
RTF1Q92541 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.62□□□□□ -1.83
RTF1Q92541 AC079354.2-201ENST00000453523 154 ntBASIC3.62□□□□□ -1.83
RTF1Q92541 AC105758.1-201ENST00000506038 399 ntBASIC3.62□□□□□ -1.83
RTF1Q92541 Y_RNA.721-201ENST00000517207 102 ntBASIC3.62□□□□□ -1.83
RTF1Q92541 CR383656.8-201ENST00000549046 145 ntBASIC3.62□□□□□ -1.83
RTF1Q92541 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.62□□□□□ -1.83
RTF1Q92541 AL117187.1-201ENST00000555482 181 ntBASIC3.62□□□□□ -1.83
RTF1Q92541 MIR3162-201ENST00000581818 82 ntBASIC3.62□□□□□ -1.83
RTF1Q92541 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RTF1Q92541 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.62□□□□□ -1.83
RTF1Q92541 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.62□□□□□ -1.83
RTF1Q92541 AC008669.1-201ENST00000565823 2178 ntBASIC3.62□□□□□ -1.83
RTF1Q92541 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.62□□□□□ -1.83
RTF1Q92541 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RTF1Q92541 AP003122.5-201ENST00000527668 3766 ntBASIC3.61□□□□□ -1.83
RTF1Q92541 DYNLT3P1-201ENST00000378574 347 ntBASIC3.61□□□□□ -1.83
RTF1Q92541 Y_RNA.455-201ENST00000384230 98 ntBASIC3.61□□□□□ -1.83
RTF1Q92541 Y_RNA.645-201ENST00000391229 102 ntBASIC3.61□□□□□ -1.83
RTF1Q92541 RNU2-52P-201ENST00000410680 190 ntBASIC3.61□□□□□ -1.83
RTF1Q92541 RNA5SP21-201ENST00000410917 96 ntBASIC3.61□□□□□ -1.83
RTF1Q92541 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.61□□□□□ -1.83
RTF1Q92541 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.61□□□□□ -1.83
RTF1Q92541 AL591043.1-201ENST00000432461 424 ntBASIC3.61□□□□□ -1.83
RTF1Q92541 AL109933.2-201ENST00000452651 260 ntBASIC3.61□□□□□ -1.83
RTF1Q92541 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.61□□□□□ -1.83
RTF1Q92541 AC112492.4-201ENST00000456549 352 ntBASIC3.61□□□□□ -1.83
RTF1Q92541 RPS29P20-201ENST00000489592 171 ntBASIC3.61□□□□□ -1.83
RTF1Q92541 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.61□□□□□ -1.83
RTF1Q92541 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.61□□□□□ -1.83
RTF1Q92541 MIR4513-201ENST00000581077 86 ntBASIC3.61□□□□□ -1.83
RTF1Q92541 MTND4LP5-201ENST00000605152 292 ntBASIC3.61□□□□□ -1.83
RTF1Q92541 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.61□□□□□ -1.83
RTF1Q92541 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RTF1Q92541 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RTF1Q92541 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RTF1Q92541 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTF1Q92541 Y_RNA.527-201ENST00000384573 102 ntBASIC3.6□□□□□ -1.83
RTF1Q92541 MIR625-201ENST00000385047 85 ntBASIC3.6□□□□□ -1.83
RTF1Q92541 RNU6-700P-201ENST00000391043 107 ntBASIC3.6□□□□□ -1.83
RTF1Q92541 BTF3L4P2-201ENST00000392798 346 ntBASIC3.6□□□□□ -1.83
RTF1Q92541 MIR548F4-201ENST00000408515 105 ntBASIC3.6□□□□□ -1.83
RTF1Q92541 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.6□□□□□ -1.83
RTF1Q92541 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.6□□□□□ -1.83
RTF1Q92541 RPL30P10-201ENST00000488148 337 ntBASIC3.6□□□□□ -1.83
RTF1Q92541 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.6□□□□□ -1.83
RTF1Q92541 SNORA31.21-201ENST00000517180 77 ntBASIC3.6□□□□□ -1.83
RTF1Q92541 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.6□□□□□ -1.83
RTF1Q92541 AC021739.1-201ENST00000559631 174 ntBASIC3.6□□□□□ -1.83
RTF1Q92541 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.6□□□□□ -1.83
RTF1Q92541 AC004584.2-201ENST00000570407 410 ntBASIC3.6□□□□□ -1.83
RTF1Q92541 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.6□□□□□ -1.83
RTF1Q92541 AC020895.1-201ENST00000595362 272 ntBASIC3.6□□□□□ -1.83
RTF1Q92541 AC104695.3-201ENST00000604052 296 ntBASIC3.6□□□□□ -1.83
RTF1Q92541 SNORD58B-201ENST00000607313 66 ntBASIC3.6□□□□□ -1.83
RTF1Q92541 AC004832.5-201ENST00000608677 401 ntBASIC3.6□□□□□ -1.83
RTF1Q92541 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.6□□□□□ -1.83
RTF1Q92541 MIR4272-201ENST00000635924 64 ntBASIC3.6□□□□□ -1.83
RTF1Q92541 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTF1Q92541 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RTF1Q92541 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.59□□□□□ -1.83
RTF1Q92541 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 MIR26A1-201ENST00000362205 77 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 RNU6-859P-201ENST00000362728 107 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 RNU6-1309P-201ENST00000363305 108 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 RNU6-1280P-201ENST00000365211 107 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 RNU6-463P-201ENST00000384340 107 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 MIR196B-201ENST00000384852 84 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RTF1Q92541 MTCYBP2-201ENST00000407745 171 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 AC007098.1-201ENST00000420122 367 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.59□□□□□ -1.83
RTF1Q92541 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RTF1Q92541 AC244505.4-201ENST00000434905 287 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 SSXP5-201ENST00000443473 287 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.59□□□□□ -1.83
RTF1Q92541 snoU13.28-201ENST00000459235 104 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms