Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
DDX1Q92499 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
DDX1Q92499 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.8□□□□□ -1.8
DDX1Q92499 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
DDX1Q92499 MIR411-201ENST00000362239 96 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 SNORD9-201ENST00000362566 104 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 RNU6-942P-201ENST00000363002 107 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 Y_RNA.439-201ENST00000384119 94 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 MIR521-1-201ENST00000384902 87 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 MIR128-1-201ENST00000384921 82 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 RPL21P75-201ENST00000396599 483 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.8□□□□□ -1.8
DDX1Q92499 RPL21P28-201ENST00000401418 483 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX1Q92499 DBIP2-201ENST00000419076 262 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 AL590556.1-201ENST00000423231 483 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
DDX1Q92499 AL445305.1-201ENST00000432577 575 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.8□□□□□ -1.8
DDX1Q92499 AL513124.1-201ENST00000450410 614 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 RPL21P39-201ENST00000463605 483 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 AC132942.1-201ENST00000486753 483 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 AC093591.1-201ENST00000491435 481 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 RPL21P16-201ENST00000495531 483 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.8□□□□□ -1.8
DDX1Q92499 RNU6-581P-201ENST00000516214 105 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 SNORA70.18-201ENST00000516696 98 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
DDX1Q92499 AC026333.2-201ENST00000542164 106 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 MIR8076-201ENST00000611401 83 ntBASIC3.8□□□□□ -1.8
DDX1Q92499 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX1Q92499 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
DDX1Q92499 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDX1Q92499 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
DDX1Q92499 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.79□□□□□ -1.8
DDX1Q92499 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDX1Q92499 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDX1Q92499 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
DDX1Q92499 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
DDX1Q92499 Y_RNA.199-201ENST00000364014 102 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 RNU6-336P-201ENST00000364891 107 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 RNY1P5-201ENST00000383890 115 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 Y_RNA.510-201ENST00000384511 114 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
DDX1Q92499 RNA5SP252-201ENST00000391131 119 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 RNU6-1245P-201ENST00000411130 106 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 COX6CP10-201ENST00000416832 224 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.79□□□□□ -1.8
DDX1Q92499 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX1Q92499 AL031183.1-201ENST00000457667 207 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 AC074198.2-201ENST00000508153 258 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 SNORA25.14-201ENST00000516481 132 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 RNU6-612P-201ENST00000516909 102 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDX1Q92499 AP002392.1-201ENST00000537692 208 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 AC006199.1-201ENST00000548728 219 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 CR383656.8-201ENST00000549046 145 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 MZT1P2-201ENST00000604387 248 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 AC005046.1-201ENST00000608515 625 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 U2.14-201ENST00000615943 113 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 AC022149.2-201ENST00000621061 203 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 AC090617.7-201ENST00000623952 126 ntBASIC3.79□□□□□ -1.8
DDX1Q92499 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
DDX1Q92499 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.79□□□□□ -1.8
DDX1Q92499 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
DDX1Q92499 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.78□□□□□ -1.8
DDX1Q92499 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.78□□□□□ -1.8
DDX1Q92499 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.78□□□□□ -1.8
DDX1Q92499 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
DDX1Q92499 MIR423-201ENST00000362201 94 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 Y_RNA.143-201ENST00000363520 106 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 Y_RNA.170-201ENST00000363746 110 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 RNU6-105P-201ENST00000363909 104 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 RNY3P4-201ENST00000384428 101 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 SNORD116-20-201ENST00000384529 92 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 MIR190B-201ENST00000401119 79 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 MTCYBP2-201ENST00000407745 171 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 Z98941.1-201ENST00000407764 100 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 RNA5SP120-201ENST00000410900 112 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX1Q92499 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX1Q92499 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX1Q92499 AL159169.1-201ENST00000421119 127 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 RPS15AP5-201ENST00000436276 388 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 RNU7-170P-201ENST00000459303 61 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 RN7SL594P-201ENST00000470590 287 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 MRPL42P6-201ENST00000486397 371 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 RNU6-496P-201ENST00000516145 99 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 MRPS36P4-201ENST00000534436 298 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 MIR7851-201ENST00000610611 160 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 MIR8058-201ENST00000615737 89 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 MIR8057-201ENST00000620957 69 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 AC021753.1-201ENST00000635724 168 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.78□□□□□ -1.8
DDX1Q92499 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
DDX1Q92499 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
DDX1Q92499 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
DDX1Q92499 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms