Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 RNU6-552P-201ENST00000362869 119 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 Y_RNA.480-201ENST00000384364 102 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 SNORA24.1-201ENST00000384401 135 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 RNU6-550P-201ENST00000391057 101 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 MIR1285-1-201ENST00000408593 84 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 RNU4-46P-201ENST00000410818 138 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AC096649.2-201ENST00000416186 393 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AL365400.1-201ENST00000431854 640 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AC107626.1-201ENST00000471084 183 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 RPL36AP48-201ENST00000485521 314 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 RPL39P36-201ENST00000490784 156 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 HMGB1P29-201ENST00000505659 499 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AC074344.1-201ENST00000512823 224 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 RNU6-703P-201ENST00000516946 107 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 RNU6-1183P-201ENST00000517054 60 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AC109347.2-201ENST00000610220 349 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AC073534.2-201ENST00000620377 381 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AP003400.5-201ENST00000624827 617 ntBASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
SHROOM3Q8TF72 Y_RNA.33-201ENST00000362591 102 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 RNU6-37P-201ENST00000362692 107 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 RNU6-11P-201ENST00000364234 107 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 RNU6-169P-201ENST00000365336 107 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 RNU6-25P-201ENST00000383873 107 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 RNU6-48P-201ENST00000384161 107 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 RNU6-16P-201ENST00000384385 107 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 RNU6-15P-201ENST00000384534 107 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 RNU6-29P-201ENST00000384637 107 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AL606923.1-201ENST00000406616 190 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 RNU6-293P-201ENST00000411259 106 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 RPS12P24-201ENST00000412619 387 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 BTF3L4P1-201ENST00000413813 468 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 USP9YP14-201ENST00000430663 563 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AC004383.1-201ENST00000438135 289 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AC023790.1-201ENST00000482174 347 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 HMGB1P30-201ENST00000492455 606 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AC105313.1-201ENST00000509121 353 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 Y_RNA.655-201ENST00000515919 96 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 Y_RNA.687-201ENST00000516558 91 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 CR383656.8-201ENST00000549046 145 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 MIR5583-1-201ENST00000580941 59 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AC090616.3-201ENST00000582184 217 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 MIR4765-201ENST00000585007 77 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AC005498.1-201ENST00000592125 465 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 MIR6767-201ENST00000637302 66 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 MIR7515-201ENST00000637837 67 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 RNU6-332P-201ENST00000391193 108 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 CIR1P3-201ENST00000405137 479 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 RNU2-16P-201ENST00000410712 136 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 snoU109.2-201ENST00000459316 135 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AC019235.1-201ENST00000503847 207 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 MTND3P25-201ENST00000509243 135 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 SNORA19.2-201ENST00000516013 114 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 RNU6-123P-201ENST00000516163 102 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 RNU2-46P-201ENST00000517038 113 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 MTND4P7-201ENST00000523876 130 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 MIR4703-201ENST00000577728 79 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 MIR3616-201ENST00000584070 92 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AL713866.2-201ENST00000603579 219 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AL355598.1-201ENST00000604169 202 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 NUTF2P8-201ENST00000604593 363 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AC007014.2-201ENST00000615581 479 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 AC024940.5-201ENST00000622889 474 ntBASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SHROOM3Q8TF72 Y_RNA.38-201ENST00000362617 102 ntBASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 RNY1P4-201ENST00000384595 115 ntBASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 MIR578-201ENST00000384828 96 ntBASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 SNORD73A-201ENST00000386062 65 ntBASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 RNU6-1158P-201ENST00000391167 107 ntBASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 RN7SKP51-201ENST00000410781 304 ntBASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.4□□□□□ -2.19
SHROOM3Q8TF72 AL583843.1-201ENST00000456070 346 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms