Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
LMX1AQ8TE12 SNORA48.1-201ENST00000390879 135 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 Y_RNA.598-201ENST00000410480 95 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 SNRPEP10-201ENST00000420249 274 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.12□□□□□ -2.23
LMX1AQ8TE12 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.12□□□□□ -2.23
LMX1AQ8TE12 HSPE1P24-201ENST00000450782 238 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 RPS29P23-201ENST00000458635 123 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AC116562.3-201ENST00000506136 177 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AC009646.1-201ENST00000510455 318 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AC090821.2-201ENST00000523552 176 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AC068587.5-201ENST00000528506 175 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AL160236.1-201ENST00000556317 195 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AC009094.1-201ENST00000564443 426 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AC091135.1-201ENST00000585943 307 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AC026585.1-201ENST00000619582 524 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AC068787.1-201ENST00000623908 691 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AL603839.4-201ENST00000624658 1005 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 AC019226.2-201ENST00000625973 424 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 MIR1248-201ENST00000629190 106 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
LMX1AQ8TE12 RNU6-179P-201ENST00000363350 107 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 SNORA62.1-201ENST00000364287 154 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 RNU5A-2P-201ENST00000384337 116 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AC011233.1-201ENST00000422812 283 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AC104850.1-201ENST00000435940 476 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AL121601.2-201ENST00000438019 707 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.11□□□□□ -2.23
LMX1AQ8TE12 UBE2D3P4-201ENST00000441973 436 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 RPL39P29-201ENST00000447779 157 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 RPL30P12-201ENST00000474666 353 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AC093259.1-201ENST00000509755 300 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AC104136.1-201ENST00000512969 394 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 RNU5F-2P-201ENST00000516066 82 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 RN7SKP265-201ENST00000516448 223 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AC090616.2-202ENST00000584248 222 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AC022022.2-201ENST00000602989 360 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AC018889.1-201ENST00000605372 397 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 PRR13P7-201ENST00000605538 430 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AC011155.2-201ENST00000623202 216 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 AC090517.3-201ENST00000625170 141 ntBASIC1.11□□□□□ -2.23
LMX1AQ8TE12 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
LMX1AQ8TE12 snoU2_19.1-201ENST00000362361 80 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 RNU6-212P-201ENST00000362642 104 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 SNORD32B-201ENST00000364460 84 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 SNORA20.2-201ENST00000383922 131 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 RNU6-74P-201ENST00000384235 107 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 Y_RNA.466-201ENST00000384294 113 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 RNU6-1222P-201ENST00000384615 107 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 MIR597-201ENST00000384968 97 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 Y_RNA.597-201ENST00000410463 100 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.1□□□□□ -2.23
LMX1AQ8TE12 OR6C66P-201ENST00000414917 930 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AC009961.2-201ENST00000435771 251 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 RPS4XP11-201ENST00000446897 772 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.1□□□□□ -2.23
LMX1AQ8TE12 MTCYBP1-201ENST00000454315 1119 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AL122001.1-201ENST00000457027 370 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.1□□□□□ -2.23
LMX1AQ8TE12 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.1□□□□□ -2.23
LMX1AQ8TE12 MTND1P22-201ENST00000510572 951 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 SNORA3.4-201ENST00000515969 96 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AC137800.2-201ENST00000574375 120 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AC234772.3-201ENST00000602277 528 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AC090578.1-201ENST00000604955 591 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AL022345.1-201ENST00000607292 135 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 AC004908.3-201ENST00000610248 625 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 RMST_2.1-201ENST00000617263 136 ntBASIC1.1□□□□□ -2.23
LMX1AQ8TE12 RNU1-93P-201ENST00000364704 169 ntBASIC1.09□□□□□ -2.23
LMX1AQ8TE12 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.09□□□□□ -2.23
LMX1AQ8TE12 RNA5SP100-201ENST00000410903 110 ntBASIC1.09□□□□□ -2.23
LMX1AQ8TE12 RNA5SP59-201ENST00000410922 110 ntBASIC1.09□□□□□ -2.23
LMX1AQ8TE12 RNA5SP111-201ENST00000411386 101 ntBASIC1.09□□□□□ -2.23
LMX1AQ8TE12 RPS3AP3-201ENST00000411933 242 ntBASIC1.09□□□□□ -2.23
LMX1AQ8TE12 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.09□□□□□ -2.23
LMX1AQ8TE12 MTND3P17-201ENST00000416968 344 ntBASIC1.09□□□□□ -2.23
LMX1AQ8TE12 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.09□□□□□ -2.23
LMX1AQ8TE12 SDAD1P3-201ENST00000427380 333 ntBASIC1.09□□□□□ -2.23
LMX1AQ8TE12 AL669831.1-202ENST00000428504 417 ntBASIC1.09□□□□□ -2.23
LMX1AQ8TE12 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.09□□□□□ -2.23
LMX1AQ8TE12 GTF2IP13-201ENST00000438487 386 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms