Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC005741.1-201ENST00000511094 432 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 SNORA14.1-201ENST00000516113 141 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 TUG1_2.1-201ENST00000614234 87 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.18-201ENST00000362461 102 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNU6-487P-201ENST00000365430 104 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AP001324.2-201ENST00000461163 319 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 MTCYBP40-201ENST00000509390 1135 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNY4P37-201ENST00000516225 96 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNU6-88P-201ENST00000606801 100 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNU6-793P-201ENST00000384233 104 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNU6-1235P-201ENST00000384559 107 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNU2-62P-201ENST00000410868 191 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNU6-498P-201ENST00000459468 107 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC079140.3-201ENST00000511111 550 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNU2-53P-201ENST00000516257 147 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNU6-948P-201ENST00000516374 107 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 SNORA31.19-201ENST00000517079 126 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC091163.3-201ENST00000518269 1144 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC018926.1-201ENST00000616335 435 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AL022718.1-201ENST00000412004 84 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC027644.1-201ENST00000419595 298 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RPS24P1-201ENST00000438550 371 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 MED28P2-201ENST00000475771 317 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 SUMO2P5-201ENST00000506790 245 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNA5SP165-201ENST00000517142 115 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC012065.4-201ENST00000602445 679 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC069114.2-201ENST00000604699 304 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC009269.6-201ENST00000621778 588 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNU6-1019P-201ENST00000364424 107 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 SNX3P1X-201ENST00000414887 175 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 MED13P1-201ENST00000428342 171 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 MTND2P3-201ENST00000452458 470 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC006026.2-201ENST00000457376 180 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 snoU13.11-201ENST00000459219 104 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 TRBVB-201ENST00000477100 408 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 SNORA43.2-201ENST00000516652 128 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNU6-678P-201ENST00000516832 109 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 MIR548AC-201ENST00000585049 88 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AL592221.1-201ENST00000605266 382 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AL022345.2-201ENST00000606307 135 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC012409.4-201ENST00000612923 249 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 U4.7-201ENST00000638126 106 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 MIR1284-201ENST00000408337 120 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 BX119904.4-201ENST00000424402 301 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 DPRXP1-201ENST00000426312 460 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AL606517.1-201ENST00000446914 387 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AL590365.1-201ENST00000450788 243 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AL162395.1-201ENST00000457882 422 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC087477.1-201ENST00000465747 340 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 MTATP6P15-201ENST00000527233 835 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AL590705.4-201ENST00000532209 134 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 MTCO2P15-201ENST00000532655 656 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 CYP3A52P-201ENST00000563326 91 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 HMGB1P33-201ENST00000563485 527 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC092325.1-201ENST00000566449 554 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC108706.1-201ENST00000611053 297 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC243829.3-201ENST00000622177 108 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNU6-414P-201ENST00000363705 104 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNY4P16-201ENST00000364768 94 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNU6-658P-201ENST00000384606 106 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.19□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.654-201ENST00000497848 106 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC119751.4-201ENST00000507498 357 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms