Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 SNORA25.6-201ENST00000364121 118 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 RNU6-461P-201ENST00000364195 107 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 RNU6-767P-201ENST00000384132 107 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 RNU6-622P-201ENST00000384272 103 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 RNU6-933P-201ENST00000384424 107 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 RNA5SP390-201ENST00000410191 113 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.85□□□□□ -1.95
USP38Q8NB14 AL135786.1-201ENST00000415892 214 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 RPL21P111-201ENST00000418453 477 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 UBE2V1P4-201ENST00000425374 344 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.85□□□□□ -1.95
USP38Q8NB14 AC243964.1-201ENST00000441814 261 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 AC013470.1-201ENST00000453438 462 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 AC073901.1-201ENST00000462471 408 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 RPL9P9-202ENST00000466501 579 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.85□□□□□ -1.95
USP38Q8NB14 RNU6-864P-201ENST00000516256 108 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.85□□□□□ -1.95
USP38Q8NB14 AC005668.1-201ENST00000571142 476 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.85□□□□□ -1.95
USP38Q8NB14 MIR4635-201ENST00000583759 79 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 AC073410.2-201ENST00000603240 332 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.85□□□□□ -1.95
USP38Q8NB14 AL138726.1-201ENST00000614873 333 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
USP38Q8NB14 AC007792.1-201ENST00000623023 402 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 AC010329.5-201ENST00000623497 2174 ntBASIC2.85□□□□□ -1.95
USP38Q8NB14 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.85□□□□□ -1.95
USP38Q8NB14 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
USP38Q8NB14 Y_RNA.212-201ENST00000364177 102 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 RNU6-1317P-201ENST00000364582 104 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 RNU6-487P-201ENST00000365430 104 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 FGF7P8-201ENST00000402994 292 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 RPL30P4-201ENST00000429309 333 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 AC007969.2-201ENST00000441891 191 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 PMCHL2-203ENST00000457791 237 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 RPL36AP21-201ENST00000490372 323 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 AC008526.1-201ENST00000509149 338 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.84□□□□□ -1.95
USP38Q8NB14 RNU6-1088P-201ENST00000516850 104 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.84□□□□□ -1.95
USP38Q8NB14 AC079598.5-201ENST00000547460 117 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 TRAV32-201ENST00000553993 340 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 MIR4742-201ENST00000581069 85 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 BNIP3P16-201ENST00000589779 534 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
USP38Q8NB14 uc_338.15-201ENST00000615470 191 ntBASIC2.84□□□□□ -1.95
USP38Q8NB14 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.84□□□□□ -1.95
USP38Q8NB14 MTND4P27-201ENST00000450813 1354 ntBASIC2.84□□□□□ -1.96
USP38Q8NB14 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
USP38Q8NB14 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
USP38Q8NB14 RNU6-1159P-201ENST00000362933 107 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 Y_RNA.355-201ENST00000365462 98 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
USP38Q8NB14 SNORD116-11-201ENST00000383882 92 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 RNU6-790P-201ENST00000384479 105 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 AL513475.1-201ENST00000406602 315 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 RPL23AP36-201ENST00000413895 458 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 AC138393.2-201ENST00000414742 246 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.83□□□□□ -1.96
USP38Q8NB14 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.83□□□□□ -1.96
USP38Q8NB14 MTND3P9-201ENST00000429526 346 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 AC011816.1-201ENST00000441346 546 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.83□□□□□ -1.96
USP38Q8NB14 RNU6-329P-201ENST00000459618 107 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.83□□□□□ -1.96
USP38Q8NB14 RNA5SP320-201ENST00000516263 124 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 Y_RNA.682-201ENST00000516457 100 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 SCOCP1-201ENST00000554676 349 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.83□□□□□ -1.96
USP38Q8NB14 AC100830.2-201ENST00000581636 240 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 AC005730.3-201ENST00000583067 366 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 AC023043.2-201ENST00000589678 1026 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 AL356575.1-201ENST00000603008 283 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 MIR7157-201ENST00000635801 60 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 MTND4P23-201ENST00000447723 1363 ntBASIC2.83□□□□□ -1.96
USP38Q8NB14 RNU6-529P-201ENST00000363383 104 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 RNU1-57P-201ENST00000384491 166 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 MIR186-201ENST00000384988 86 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 RPS29P13-201ENST00000402041 169 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 RNU6-325P-201ENST00000411132 105 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 MTND3P8-201ENST00000412909 339 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 DPH3P2-201ENST00000422618 250 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 Z82205.1-201ENST00000428456 297 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 AC245517.4-201ENST00000448601 281 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 MTND3P10-201ENST00000450967 341 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 RNU7-187P-201ENST00000458985 68 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 U8.21-201ENST00000459536 136 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 AC130509.1-201ENST00000464158 433 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 SRIP1-201ENST00000489235 288 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.82□□□□□ -1.96
USP38Q8NB14 RN7SKP24-201ENST00000515888 284 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 RNU6-612P-201ENST00000516909 102 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 CKS1BP7-201ENST00000522230 235 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.82□□□□□ -1.96
USP38Q8NB14 MIR4790-201ENST00000577799 79 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.82□□□□□ -1.96
USP38Q8NB14 AL356280.1-201ENST00000603614 379 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 AC069294.1-201ENST00000608397 350 ntBASIC2.82□□□□□ -1.96
USP38Q8NB14 DUXAP9-208ENST00000622815 614 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms