Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
CCDC63Q8NA47 MIR3662-201ENST00000637030 95 ntBASIC2.2□□□□□ -2.06
CCDC63Q8NA47 RNU6-1141P-201ENST00000364520 107 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 MIR491-201ENST00000384877 84 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 SNORA46.1-201ENST00000391069 153 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 MIR450B-201ENST00000401182 78 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC63Q8NA47 CYP2C59P-201ENST00000457790 269 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 AC018868.1-201ENST00000491307 315 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC63Q8NA47 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC63Q8NA47 AC008413.1-201ENST00000511864 177 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 RNA5SP356-201ENST00000515972 94 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 RNU6-1332P-201ENST00000516666 104 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 RNU7-193P-201ENST00000516723 65 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 SNORA48.11-201ENST00000517015 89 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC63Q8NA47 MIR5002-201ENST00000584713 97 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 AL355297.2-201ENST00000604792 129 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 AC084782.3-201ENST00000612282 578 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
CCDC63Q8NA47 AL162373.1-201ENST00000620433 407 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 uc_338.20-201ENST00000621563 178 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC63Q8NA47 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC63Q8NA47 MTND4P23-201ENST00000447723 1363 ntBASIC2.19□□□□□ -2.06
CCDC63Q8NA47 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CCDC63Q8NA47 MIR208A-201ENST00000362287 71 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 snoU2_19.1-201ENST00000362361 80 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 RNU6-1252P-201ENST00000363054 104 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 RNA5SP160-201ENST00000364866 120 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 Y_RNA.530-201ENST00000384587 101 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 MIR17-201ENST00000385012 84 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CCDC63Q8NA47 RN7SKP158-201ENST00000410453 326 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 RNU2-40P-201ENST00000410833 196 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 RNU6-373P-201ENST00000411247 98 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 AP000275.1-201ENST00000411943 390 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 AL513185.2-201ENST00000425543 193 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 FGF7P6-202ENST00000451282 293 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 AL109933.2-201ENST00000452651 260 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 RPS29P27-201ENST00000463711 170 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 AC069439.1-201ENST00000494739 167 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC63Q8NA47 RNU6-586P-201ENST00000517265 104 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.18□□□□□ -2.06
CCDC63Q8NA47 AP003033.1-201ENST00000527244 415 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC63Q8NA47 LARP7P3-201ENST00000579888 337 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 AC100830.2-201ENST00000581636 240 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.18□□□□□ -2.06
CCDC63Q8NA47 AC008749.1-201ENST00000597650 306 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 AP000907.4-201ENST00000604143 237 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 AC098657.3-201ENST00000620434 263 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 MIR6132-201ENST00000622083 109 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 AL450472.1-202ENST00000637286 180 ntBASIC2.18□□□□□ -2.06
CCDC63Q8NA47 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CCDC63Q8NA47 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CCDC63Q8NA47 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CCDC63Q8NA47 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC63Q8NA47 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC63Q8NA47 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CCDC63Q8NA47 SNORD113-7-201ENST00000363762 77 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 RNU6-944P-201ENST00000364023 107 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 MIR221-201ENST00000385135 110 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 RNA5SP118-201ENST00000410385 109 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 RN7SKP61-201ENST00000410642 295 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 RPS15AP10-201ENST00000432472 382 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 MTCO3P18-201ENST00000440206 761 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC63Q8NA47 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC63Q8NA47 AC108938.1-201ENST00000451204 136 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC63Q8NA47 RPS3P1-201ENST00000456781 192 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 AMD1P1-201ENST00000457220 922 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 RNU6-1037P-201ENST00000459571 107 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 SNRPGP7-201ENST00000469016 106 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC63Q8NA47 HMGB1P35-201ENST00000503360 598 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 RNU6-1314P-201ENST00000517139 104 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 MTND4LP26-201ENST00000518144 282 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC63Q8NA47 SCOCP1-201ENST00000554676 349 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC63Q8NA47 ANP32BP3-201ENST00000559213 706 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 AL033523.1-201ENST00000605153 153 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC63Q8NA47 AC002553.4-201ENST00000616896 331 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 AC009831.4-201ENST00000620744 325 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 AC090517.3-201ENST00000625170 141 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 SNORA43.4-201ENST00000629559 138 ntBASIC2.17□□□□□ -2.06
CCDC63Q8NA47 Y_RNA.100-201ENST00000363141 102 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 Y_RNA.157-201ENST00000363638 102 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 Y_RNA.414-201ENST00000384011 101 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CCDC63Q8NA47 SNORA26.3-201ENST00000391119 136 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 RNU2-48P-201ENST00000410694 191 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms