Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC007671.2-201ENST00000637344 619 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AC245060.5-201ENST00000610778 3293 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 MTND5P9-201ENST00000503854 1755 ntBASIC1.06□□□□□ -2.24
ZIC4Q8N9L1 AC091812.1-201ENST00000432235 1948 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 RNU6-500P-201ENST00000362349 107 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 RNU6-271P-201ENST00000363858 105 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 RNU5E-5P-201ENST00000365379 116 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 RNU6-438P-201ENST00000365561 103 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 RNU6-116P-201ENST00000384042 109 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 RNU6-45P-201ENST00000384471 107 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 Y_RNA.576-201ENST00000384781 102 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 RPL23AP36-201ENST00000413895 458 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 CYCSP33-201ENST00000414485 327 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 OR6C66P-201ENST00000414917 930 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 RPL30P13-201ENST00000418873 348 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 RPL31P58-201ENST00000469001 379 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 AC093852.1-201ENST00000503587 266 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 SNORD60.2-201ENST00000516883 86 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 AC109479.2-201ENST00000517842 174 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 HMGB1P33-201ENST00000563485 527 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 AC008752.3-201ENST00000588113 712 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 AC016727.1-205ENST00000605437 569 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 AC104073.3-201ENST00000610942 955 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 AC022513.1-201ENST00000624512 117 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 U6.114-201ENST00000636407 96 ntBASIC1.05□□□□□ -2.24
ZIC4Q8N9L1 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 RNU6-1141P-201ENST00000364520 107 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 SNORD26-201ENST00000384147 75 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 AL669831.1-202ENST00000428504 417 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 MTATP6P16-201ENST00000434543 526 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 JTBP1-201ENST00000441314 247 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 AC243964.1-201ENST00000441814 261 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 RPS27AP8-201ENST00000452665 445 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 SNRPFP4-201ENST00000456366 242 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 RPL31P3-201ENST00000458430 332 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 Y_RNA.638-201ENST00000459374 113 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 RPL9P9-202ENST00000466501 579 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 SNRPGP7-201ENST00000469016 106 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 RPS26P55-201ENST00000471178 356 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 AC099513.1-201ENST00000490423 301 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 RPL21P5-201ENST00000554662 472 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 BNIP3P16-201ENST00000589779 534 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 AC110760.3-201ENST00000598794 467 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 AL359821.1-201ENST00000605519 182 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 AL121992.2-201ENST00000606262 256 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 MIR7844-201ENST00000616161 122 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 AL121890.5-201ENST00000620848 304 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 MIR8063-201ENST00000621930 81 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 MTND5P17-201ENST00000418405 1603 ntBASIC1.04□□□□□ -2.24
ZIC4Q8N9L1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 ICE2P2-201ENST00000483823 2787 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 SNORD33-201ENST00000362761 85 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 Y_RNA.324-201ENST00000365165 102 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 SNORD115-7-201ENST00000365306 82 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 RNU6-296P-201ENST00000384608 107 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 MIR520A-201ENST00000384862 85 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 RNU6-293P-201ENST00000411259 106 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 AL590135.1-201ENST00000422215 156 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 AC019205.3-201ENST00000424573 156 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 AL356583.2-201ENST00000426536 280 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 AC244670.1-201ENST00000436879 112 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 AC016700.2-201ENST00000446011 156 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 RPL26P26-201ENST00000480251 434 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 AC015911.1-201ENST00000495111 156 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 SCARNA24.1-201ENST00000516465 137 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 SNORA77B-201ENST00000578179 125 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 MIR6078-201ENST00000611069 100 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 AL078595.3-201ENST00000623815 1166 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 AC099654.13-201ENST00000639774 207 ntBASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
ZIC4Q8N9L1 MIR26B-201ENST00000362251 77 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms