Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AL137159.1-201ENST00000452808 512 ntBASIC2.69□□□□□ -1.98
PAF1Q8N7H5 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PAF1Q8N7H5 RN7SL297P-201ENST00000483161 293 ntBASIC2.69□□□□□ -1.98
PAF1Q8N7H5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.69□□□□□ -1.98
PAF1Q8N7H5 MIR3136-201ENST00000583498 78 ntBASIC2.69□□□□□ -1.98
PAF1Q8N7H5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
PAF1Q8N7H5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.69□□□□□ -1.98
PAF1Q8N7H5 AL033523.1-201ENST00000605153 153 ntBASIC2.69□□□□□ -1.98
PAF1Q8N7H5 AC104237.2-201ENST00000612456 443 ntBASIC2.69□□□□□ -1.98
PAF1Q8N7H5 FAM157A-202ENST00000615155 405 ntBASIC2.69□□□□□ -1.98
PAF1Q8N7H5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PAF1Q8N7H5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.68□□□□□ -1.98
PAF1Q8N7H5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
PAF1Q8N7H5 SNORA32.2-201ENST00000384049 122 ntBASIC2.68□□□□□ -1.98
PAF1Q8N7H5 MIR9-1-201ENST00000385198 89 ntBASIC2.68□□□□□ -1.98
PAF1Q8N7H5 EIF4E2P1-201ENST00000393781 255 ntBASIC2.68□□□□□ -1.98
PAF1Q8N7H5 AL355497.1-201ENST00000406262 551 ntBASIC2.68□□□□□ -1.98
PAF1Q8N7H5 RN7SKP61-201ENST00000410642 295 ntBASIC2.68□□□□□ -1.98
PAF1Q8N7H5 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.68□□□□□ -1.98
PAF1Q8N7H5 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.68□□□□□ -1.98
PAF1Q8N7H5 CBX3P6-201ENST00000430257 527 ntBASIC2.68□□□□□ -1.98
PAF1Q8N7H5 MTCO2P3-201ENST00000442543 421 ntBASIC2.68□□□□□ -1.98
PAF1Q8N7H5 AC007547.1-201ENST00000462177 490 ntBASIC2.68□□□□□ -1.98
PAF1Q8N7H5 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.68□□□□□ -1.98
PAF1Q8N7H5 RNU6-965P-201ENST00000516721 96 ntBASIC2.68□□□□□ -1.98
PAF1Q8N7H5 MIR4529-201ENST00000578110 78 ntBASIC2.68□□□□□ -1.98
PAF1Q8N7H5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PAF1Q8N7H5 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.68□□□□□ -1.98
PAF1Q8N7H5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PAF1Q8N7H5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PAF1Q8N7H5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.68□□□□□ -1.98
PAF1Q8N7H5 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.68□□□□□ -1.98
PAF1Q8N7H5 AL136360.1-201ENST00000503377 1900 ntBASIC2.68□□□□□ -1.98
PAF1Q8N7H5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PAF1Q8N7H5 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
PAF1Q8N7H5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
PAF1Q8N7H5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PAF1Q8N7H5 AL596028.1-201ENST00000326971 197 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 Y_RNA.160-201ENST00000363677 92 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 RNA5SP210-201ENST00000391034 120 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 AL360182.1-201ENST00000397433 468 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 USP9YP20-201ENST00000419224 558 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 AL590556.1-201ENST00000423231 483 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 AC078809.1-201ENST00000427601 140 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.67□□□□□ -1.98
PAF1Q8N7H5 MTCO3P18-201ENST00000440206 761 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 AC090525.1-201ENST00000479116 478 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.67□□□□□ -1.98
PAF1Q8N7H5 AC010486.1-201ENST00000511793 424 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 SNORA19.2-201ENST00000516013 114 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 RNA5SP82-201ENST00000516707 92 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 SNORA31.16-201ENST00000516773 139 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 SNORA20.3-201ENST00000516880 132 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.67□□□□□ -1.98
PAF1Q8N7H5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.67□□□□□ -1.98
PAF1Q8N7H5 MIR3670-2-201ENST00000582974 65 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 MIR3670-1-201ENST00000584160 65 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 MIR3670-3-201ENST00000584855 65 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 MIR3942-201ENST00000585264 109 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 AP001836.1-201ENST00000604675 523 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 AL357078.3-201ENST00000607528 618 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 MIR3670-4-201ENST00000612260 65 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
PAF1Q8N7H5 AC009248.2-201ENST00000619826 254 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 MIR203B-201ENST00000636080 86 ntBASIC2.67□□□□□ -1.98
PAF1Q8N7H5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PAF1Q8N7H5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PAF1Q8N7H5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.66□□□□□ -1.98
PAF1Q8N7H5 Y_RNA.279-201ENST00000364763 95 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 RNU6-142P-201ENST00000384019 107 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 MIR450B-201ENST00000401182 78 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 AL133396.1-201ENST00000432048 687 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.66□□□□□ -1.98
PAF1Q8N7H5 MTATP6P23-201ENST00000440153 476 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.66□□□□□ -1.98
PAF1Q8N7H5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.66□□□□□ -1.98
PAF1Q8N7H5 PRELID3BP1-201ENST00000457142 540 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 SRIP1-201ENST00000489235 288 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.66□□□□□ -1.98
PAF1Q8N7H5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.66□□□□□ -1.98
PAF1Q8N7H5 RNU4-49P-201ENST00000516080 140 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 AC134698.4-201ENST00000523451 826 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 AP005597.4-201ENST00000526762 229 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 HSPE1P4-201ENST00000550617 308 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.66□□□□□ -1.98
PAF1Q8N7H5 MIR3672-201ENST00000584290 82 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PAF1Q8N7H5 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 AC009033.1-201ENST00000624279 431 ntBASIC2.66□□□□□ -1.98
PAF1Q8N7H5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.66□□□□□ -1.98
PAF1Q8N7H5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PAF1Q8N7H5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
PAF1Q8N7H5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.65□□□□□ -1.98
PAF1Q8N7H5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.65□□□□□ -1.99
PAF1Q8N7H5 Y_RNA.530-201ENST00000384587 101 ntBASIC2.65□□□□□ -1.99
PAF1Q8N7H5 MIR518A2-201ENST00000384966 87 ntBASIC2.65□□□□□ -1.99
PAF1Q8N7H5 SNORA26.3-201ENST00000391119 136 ntBASIC2.65□□□□□ -1.99
PAF1Q8N7H5 AL356057.3-201ENST00000402607 340 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms