Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RPL31P13-201ENST00000484151 370 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 RNA5SP367-201ENST00000516557 118 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 RNA5SP291-201ENST00000517222 105 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 AC011602.1-201ENST00000546484 331 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 AC104581.2-201ENST00000572227 430 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 uc_338.25-201ENST00000613756 156 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 AP001282.2-201ENST00000616149 309 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 SDR42E1P4-201ENST00000620894 481 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 AC243829.7-201ENST00000633081 225 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 U2.21-201ENST00000637295 81 ntBASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC44A3Q8N4M1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 Y_RNA.27-201ENST00000362540 103 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 RNU5E-7P-201ENST00000365290 117 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 MIR190B-201ENST00000401119 79 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 TOMM20P4-201ENST00000427861 435 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 AL590383.1-201ENST00000428602 75 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 AL139132.1-201ENST00000431587 344 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 RN7SKP210-201ENST00000459176 261 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 AC010401.1-201ENST00000463867 348 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 RPL39P38-201ENST00000467018 153 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 RPS4XP22-201ENST00000480755 780 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 AC010469.2-201ENST00000496412 480 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 RNU6-1073P-201ENST00000517182 106 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 AL442163.3-201ENST00000554110 156 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 AMZ2P1-203ENST00000565833 850 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 AC012433.1-201ENST00000588916 398 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 AC060766.3-201ENST00000591442 263 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 RPS29P30-201ENST00000600975 111 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 MIR6715A-201ENST00000615929 79 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 AC027309.3-201ENST00000623419 351 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 SCARNA4-202ENST00000625402 129 ntBASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SLC44A3Q8N4M1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 RNU1-75P-201ENST00000347264 129 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 RNU6-105P-201ENST00000363909 104 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 Y_RNA.458-201ENST00000384240 102 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 MIR518D-201ENST00000385014 87 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 RNA5SP293-201ENST00000410527 113 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 RNA5SP31-201ENST00000411144 127 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 RPL23AP22-201ENST00000437556 453 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 MTND4LP30-201ENST00000454092 297 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 RPS4XP2-201ENST00000458402 793 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 snoU109.2-201ENST00000459316 135 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 TRBVB-201ENST00000477100 408 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 RPS29P26-201ENST00000477483 171 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 RNU6-377P-201ENST00000515965 102 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 RNU6-570P-201ENST00000517051 105 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.21□□□□□ -1.9
SLC44A3Q8N4M1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 MIR22-201ENST00000362190 85 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 Y_RNA.123-201ENST00000363338 102 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 RNU6-217P-201ENST00000384164 104 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 Y_RNA.477-201ENST00000384352 108 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 RNU4-70P-201ENST00000384579 139 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 RPL21P75-201ENST00000396599 483 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 RPL21P28-201ENST00000401418 483 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 AL603908.1-201ENST00000406098 201 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 AP000275.1-201ENST00000411943 390 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 AL590556.1-201ENST00000423231 483 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 BX679664.1-201ENST00000434429 253 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 AL135938.1-201ENST00000443141 297 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 RPL21P39-201ENST00000463605 483 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 AC087190.1-201ENST00000484462 480 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 AC107032.1-201ENST00000485945 480 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 AC132942.1-201ENST00000486753 483 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 AC093591.1-201ENST00000491435 481 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 RPL21P16-201ENST00000495531 483 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 RN7SKP272-201ENST00000516988 232 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 SNORA31.18-201ENST00000517043 134 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 AP002770.2-201ENST00000543613 532 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC44A3Q8N4M1 U6.92-201ENST00000636464 89 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms