Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC115990.1-201ENST00000526957 301 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.5□□□□□ -2.01
BEST3Q8N1M1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.5□□□□□ -2.01
BEST3Q8N1M1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.5□□□□□ -2.01
BEST3Q8N1M1 AC103810.1-201ENST00000579873 453 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.5□□□□□ -2.01
BEST3Q8N1M1 AC073410.2-201ENST00000603240 332 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 C8orf59P2-201ENST00000603441 271 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 AL159153.1-201ENST00000619688 317 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 MAPK10-266ENST00000641066 6555 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 AC009541.1-201ENST00000438279 2662 ntBASIC2.5□□□□□ -2.01
BEST3Q8N1M1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
BEST3Q8N1M1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.49□□□□□ -2.01
BEST3Q8N1M1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
BEST3Q8N1M1 RNU6-797P-201ENST00000363101 109 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 RNU6-1050P-201ENST00000410388 107 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 RN7SKP61-201ENST00000410642 295 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 RNU4-14P-201ENST00000410858 122 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 BX276092.3-201ENST00000424182 230 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 Z82205.1-201ENST00000428456 297 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.49□□□□□ -2.01
BEST3Q8N1M1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.49□□□□□ -2.01
BEST3Q8N1M1 FTH1P25-201ENST00000447665 469 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 snoU13.14-201ENST00000459372 104 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 AC026782.1-201ENST00000512952 449 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 RNU6-559P-201ENST00000516151 98 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.49□□□□□ -2.01
BEST3Q8N1M1 COX6CP5-201ENST00000527162 228 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.49□□□□□ -2.01
BEST3Q8N1M1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.49□□□□□ -2.01
BEST3Q8N1M1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.49□□□□□ -2.01
BEST3Q8N1M1 MIR5690-201ENST00000583739 73 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 PISRT1.1-201ENST00000616930 107 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 AC098657.3-201ENST00000620434 263 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 AL359757.2-201ENST00000624309 274 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 AL359697.1-201ENST00000624879 587 ntBASIC2.49□□□□□ -2.01
BEST3Q8N1M1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
BEST3Q8N1M1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.48□□□□□ -2.01
BEST3Q8N1M1 AP000560.1-201ENST00000624150 1937 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.48□□□□□ -2.01
BEST3Q8N1M1 RNU6-212P-201ENST00000362642 104 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 RNU6-529P-201ENST00000363383 104 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 RNU6-1285P-201ENST00000363480 105 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 RNU6-1297P-201ENST00000384415 104 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 MIR186-201ENST00000384988 86 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 AL356057.3-201ENST00000402607 340 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 AL591034.2-201ENST00000402839 359 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 EIF1AXP1-201ENST00000419267 435 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.48□□□□□ -2.01
BEST3Q8N1M1 AC112220.1-201ENST00000434628 355 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.48□□□□□ -2.01
BEST3Q8N1M1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.48□□□□□ -2.01
BEST3Q8N1M1 SNRPGP7-201ENST00000469016 106 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 AC090525.1-201ENST00000479116 478 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.48□□□□□ -2.01
BEST3Q8N1M1 AC096725.1-201ENST00000514266 313 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 SNORA9.3-201ENST00000516383 129 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 Y_RNA.675-201ENST00000516389 149 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 SCARNA3-201ENST00000517097 143 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.48□□□□□ -2.01
BEST3Q8N1M1 HSPE1P4-201ENST00000550617 308 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.48□□□□□ -2.01
BEST3Q8N1M1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.48□□□□□ -2.01
BEST3Q8N1M1 MIR3605-201ENST00000583214 100 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 AC092608.2-201ENST00000624427 218 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 IGHVIII-44-202ENST00000636235 289 ntBASIC2.48□□□□□ -2.01
BEST3Q8N1M1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC092268.1-201ENST00000342691 405 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 Y_RNA.123-201ENST00000363338 102 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 RNU6-142P-201ENST00000384019 107 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 RNU6-784P-201ENST00000384330 106 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 RPL21P75-201ENST00000396599 483 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 RPL21P28-201ENST00000401418 483 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 U6atac.2-201ENST00000408644 118 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 Y_RNA.594-201ENST00000410373 140 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 RNU6-370P-201ENST00000411008 104 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 EIF4EP2-201ENST00000422816 654 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 EIF4EP4-201ENST00000424916 578 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.47□□□□□ -2.01
BEST3Q8N1M1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC244670.1-201ENST00000436879 112 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 RPS15AP7-201ENST00000439294 405 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 RPL21P39-201ENST00000463605 483 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC087190.1-201ENST00000484462 480 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC093591.1-201ENST00000491435 481 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC104564.1-201ENST00000493028 407 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 RPL21P16-201ENST00000495531 483 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC016632.1-201ENST00000503994 196 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 SNORA25.11-201ENST00000515935 105 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC093027.1-201ENST00000546698 429 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC004486.1-201ENST00000546846 233 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC007375.1-201ENST00000554513 578 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC027176.1-201ENST00000560204 514 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC109446.1-201ENST00000566172 220 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms