Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL356057.1-201ENST00000533798 831 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 AC007834.2-201ENST00000536310 343 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 MIR3198-2-201ENST00000577868 80 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 MIR4713-201ENST00000582691 75 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 AC018889.1-201ENST00000605372 397 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 AC087752.4-201ENST00000605911 462 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 AC116312.1-201ENST00000606841 314 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 AC073114.1-201ENST00000612027 490 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 uc_338.11-201ENST00000619132 160 ntBASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CCDC65Q8IXS2 RNU4-15P-201ENST00000362613 141 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 MIR517C-201ENST00000385103 95 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 SNORA40.19-201ENST00000390846 128 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 RNU6-903P-201ENST00000391270 109 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC068050.1-201ENST00000394891 380 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 SNORA11.2-201ENST00000408318 127 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 PRPS1P1-201ENST00000445305 876 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AL360221.1-201ENST00000445989 335 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC022364.2-201ENST00000457963 554 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 SNORD13-201ENST00000459299 104 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC023790.1-201ENST00000482174 347 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC079382.1-201ENST00000493346 557 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 SUB1P2-201ENST00000556401 297 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 SNORD53B-201ENST00000577887 78 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC002044.1-201ENST00000606707 158 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC109347.2-201ENST00000610220 349 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC005858.4-201ENST00000623191 700 ntBASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC65Q8IXS2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 AL390237.1-201ENST00000404226 1415 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 RNU6-434P-201ENST00000384376 107 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 RPS29P13-201ENST00000402041 169 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 MIR1304-201ENST00000408243 91 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 RNU6-955P-201ENST00000410497 104 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 RNU6-293P-201ENST00000411259 106 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 AL117339.3-201ENST00000418733 162 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 MTND2P29-201ENST00000438595 412 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 AL356010.1-201ENST00000456364 102 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 RNU6-377P-201ENST00000515965 102 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 COPS8P3-201ENST00000526024 482 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 OSBPL9P5-201ENST00000542581 171 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 MIR5583-1-201ENST00000580941 59 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 MTATP6P3-201ENST00000581686 676 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 AL670379.2-201ENST00000604983 252 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 AL158063.1-201ENST00000615349 536 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 AC072046.2-201ENST00000618366 268 ntBASIC1.69□□□□□ -2.14
CCDC65Q8IXS2 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 SNORD115-3-201ENST00000363100 82 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 SNORD32B-201ENST00000364460 84 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 SNORD32A-201ENST00000364805 84 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 Y_RNA.399-201ENST00000383955 105 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 RNU6-43P-201ENST00000384302 107 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 SNORD14D-201ENST00000384390 87 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 RNA5SP212-201ENST00000391223 107 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 RN7SKP51-201ENST00000410781 304 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 SRIP3-201ENST00000413200 219 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 MTATP6P18-201ENST00000417994 673 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 CBX3P6-201ENST00000430257 527 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 MTND1P27-201ENST00000451117 902 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 AC105417.1-201ENST00000514691 285 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 Y_RNA.695-201ENST00000516715 107 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 BNIP3P16-201ENST00000589779 534 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 AL391646.1-201ENST00000603860 190 ntBASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC65Q8IXS2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 RNU6-1120P-201ENST00000362988 108 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 Y_RNA.480-201ENST00000384364 102 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 MIR29C-201ENST00000385231 88 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 MIR1323-201ENST00000408090 73 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 RNU2-29P-201ENST00000410423 189 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 RN7SKP284-201ENST00000411002 343 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 AL513185.2-201ENST00000425543 193 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 AL591806.2-201ENST00000433122 173 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 MTND2P33-201ENST00000506452 1031 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms