Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC109347.2-201ENST00000610220 349 ntBASIC1.6□□□□□ -2.15
NUDCD3Q8IVD9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
NUDCD3Q8IVD9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
NUDCD3Q8IVD9 AC084768.2-201ENST00000622736 221 ntBASIC1.6□□□□□ -2.15
NUDCD3Q8IVD9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.6□□□□□ -2.15
NUDCD3Q8IVD9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
NUDCD3Q8IVD9 Y_RNA.99-201ENST00000363138 105 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 RNU6-266P-201ENST00000364225 107 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 SNORD32B-201ENST00000364460 84 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 RNU2-29P-201ENST00000410423 189 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 MTATP6P18-201ENST00000417994 673 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 AL117339.3-201ENST00000418733 162 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 AL360221.1-201ENST00000445989 335 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 AL031274.1-201ENST00000450334 232 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 AC008834.1-201ENST00000511612 175 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 RN7SKP219-201ENST00000516825 296 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 MTCO3P23-201ENST00000561363 289 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 AL391840.1-201ENST00000571144 367 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 MIR4528-201ENST00000577763 90 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 RSL24D1P11-201ENST00000591045 491 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 AC121247.2-201ENST00000604776 136 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 uc_338.5-201ENST00000611839 155 ntBASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.59□□□□□ -2.15
NUDCD3Q8IVD9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 MIR126-201ENST00000362291 85 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 RNU6-1120P-201ENST00000362988 108 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 Y_RNA.159-201ENST00000363674 87 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 RNU6-1141P-201ENST00000364520 107 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 RNU6-903P-201ENST00000391270 109 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 RPS29P13-201ENST00000402041 169 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 AC244670.1-201ENST00000436879 112 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 RNA5SP57-201ENST00000459463 123 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 AC023790.1-201ENST00000482174 347 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 AC022447.4-201ENST00000504053 364 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 Y_RNA.695-201ENST00000516715 107 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 SNORA31.16-201ENST00000516773 139 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 MTCO2P4-201ENST00000517968 247 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 AC103996.1-201ENST00000555468 102 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 MIR5583-1-201ENST00000580941 59 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 MTATP6P3-201ENST00000581686 676 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 AC110760.3-201ENST00000598794 467 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 AP000654.2-201ENST00000605633 586 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 AC025754.2-201ENST00000606491 432 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 AP001596.2-201ENST00000608410 312 ntBASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.58□□□□□ -2.16
NUDCD3Q8IVD9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 AL356292.1-201ENST00000283110 373 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 RNU6-552P-201ENST00000362869 119 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 SNORD32A-201ENST00000364805 84 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 RNU6-827P-201ENST00000365553 106 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 RNU6-142P-201ENST00000384019 107 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 AC068050.1-201ENST00000394891 380 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 AL590135.1-201ENST00000422215 156 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 EIF4EP2-201ENST00000422816 654 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 AC019205.3-201ENST00000424573 156 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 UBE2V1P4-201ENST00000425374 344 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 CETN4P-201ENST00000432407 469 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 AC016700.2-201ENST00000446011 156 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 AL356010.1-201ENST00000456364 102 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 SNRPFP3-201ENST00000457792 225 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 UBL5P3-201ENST00000475112 231 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 AC015911.1-201ENST00000495111 156 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 RPL23AP63-201ENST00000498752 471 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 ARL2BPP4-201ENST00000506854 471 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 AC105417.1-201ENST00000514691 285 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 COPS8P3-201ENST00000526024 482 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 MIR3136-201ENST00000583498 78 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 CYP2C61P-201ENST00000604072 290 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 AL158063.1-201ENST00000615349 536 ntBASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
NUDCD3Q8IVD9 AP000560.1-201ENST00000624150 1937 ntBASIC1.56□□□□□ -2.16
NUDCD3Q8IVD9 Y_RNA.399-201ENST00000383955 105 ntBASIC1.56□□□□□ -2.16
NUDCD3Q8IVD9 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
NUDCD3Q8IVD9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
NUDCD3Q8IVD9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.56□□□□□ -2.16
NUDCD3Q8IVD9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.56□□□□□ -2.16
NUDCD3Q8IVD9 MTCYBP8-201ENST00000422855 651 ntBASIC1.56□□□□□ -2.16
NUDCD3Q8IVD9 SNAP23P1-201ENST00000433229 246 ntBASIC1.56□□□□□ -2.16
NUDCD3Q8IVD9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.56□□□□□ -2.16
NUDCD3Q8IVD9 AC104564.1-201ENST00000493028 407 ntBASIC1.56□□□□□ -2.16
NUDCD3Q8IVD9 AC021146.2-201ENST00000504736 556 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms