Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC016632.1-201ENST00000503994 196 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 TRAV32-201ENST00000553993 340 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 MIR5007-201ENST00000583098 95 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 AC078899.2-201ENST00000595282 212 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 AC092954.2-201ENST00000609103 430 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.36□□□□□ -2.03
PRPF39Q86UA1 Y_RNA.231-201ENST00000364358 102 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 Y_RNA.504-201ENST00000384481 104 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 RN7SKP223-201ENST00000410582 62 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.35□□□□□ -2.03
PRPF39Q86UA1 AC078809.1-201ENST00000427601 140 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 CBX3P6-201ENST00000430257 527 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.35□□□□□ -2.03
PRPF39Q86UA1 RPS15AP28-201ENST00000435088 386 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 FTH1P25-201ENST00000447665 469 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.35□□□□□ -2.03
PRPF39Q86UA1 snoU13.26-201ENST00000459452 105 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 RPS29P21-201ENST00000496272 170 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 AC145146.1-201ENST00000496370 254 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.35□□□□□ -2.03
PRPF39Q86UA1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.35□□□□□ -2.03
PRPF39Q86UA1 RNA5SP82-201ENST00000516707 92 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.35□□□□□ -2.03
PRPF39Q86UA1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.35□□□□□ -2.03
PRPF39Q86UA1 MYL12BP1-201ENST00000569826 507 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 MIR1273D-201ENST00000577266 86 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.35□□□□□ -2.03
PRPF39Q86UA1 AP001836.1-201ENST00000604675 523 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 AC018889.1-201ENST00000605372 397 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 DISC2.1-201ENST00000612827 205 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 MIR6895-201ENST00000613497 78 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 MIR6873-201ENST00000622788 63 ntBASIC2.35□□□□□ -2.03
PRPF39Q86UA1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PRPF39Q86UA1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PRPF39Q86UA1 AC092268.1-201ENST00000342691 405 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 MIRLET7G-201ENST00000362280 84 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 Y_RNA.41-201ENST00000362646 102 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 RNU6-142P-201ENST00000384019 107 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 SNORA6-201ENST00000384033 151 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 RNU6-611P-201ENST00000384276 104 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 MIR1294-201ENST00000408503 142 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.34□□□□□ -2.03
PRPF39Q86UA1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PRPF39Q86UA1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.34□□□□□ -2.03
PRPF39Q86UA1 AL031659.1-201ENST00000447075 539 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 AC245102.2-201ENST00000448956 180 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.34□□□□□ -2.03
PRPF39Q86UA1 RNU6-1069P-201ENST00000516612 133 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 SNORA31.25-201ENST00000517242 134 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.34□□□□□ -2.03
PRPF39Q86UA1 AC104576.1-201ENST00000524225 88 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 AP000889.2-201ENST00000532684 490 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 AC233702.2-202ENST00000562547 291 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
PRPF39Q86UA1 AC068137.3-201ENST00000639191 341 ntBASIC2.34□□□□□ -2.03
PRPF39Q86UA1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.04
PRPF39Q86UA1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.34□□□□□ -2.04
PRPF39Q86UA1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PRPF39Q86UA1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PRPF39Q86UA1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PRPF39Q86UA1 SNORD32A-201ENST00000364805 84 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 RNU6-214P-201ENST00000384130 107 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 EIF4E2P1-201ENST00000393781 255 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 HMGN2P39-201ENST00000398005 273 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 RN7SKP61-201ENST00000410642 295 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 USP9YP27-201ENST00000418455 438 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.33□□□□□ -2.04
PRPF39Q86UA1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.33□□□□□ -2.04
PRPF39Q86UA1 MRPS10P2-201ENST00000431226 381 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 IFNA20P-201ENST00000436840 528 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 GPM6BP3-201ENST00000442797 145 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.33□□□□□ -2.04
PRPF39Q86UA1 UBL5P3-201ENST00000475112 231 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 RPL38P4-201ENST00000502376 214 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 SNORA31.16-201ENST00000516773 139 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 HSPE1P18-201ENST00000517602 280 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 AC018630.3-201ENST00000542637 96 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.33□□□□□ -2.04
PRPF39Q86UA1 MIR5694-201ENST00000581190 76 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 MIR5692C1-201ENST00000585309 91 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.33□□□□□ -2.04
PRPF39Q86UA1 AF250324.2-201ENST00000608299 610 ntBASIC2.33□□□□□ -2.04
PRPF39Q86UA1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
PRPF39Q86UA1 RNU4-15P-201ENST00000362613 141 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 MIR514A2-201ENST00000385131 88 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 MIR514A3-201ENST00000385132 88 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 SNORA40.19-201ENST00000390846 128 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PRPF39Q86UA1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.32□□□□□ -2.04
PRPF39Q86UA1 MTND3P21-201ENST00000433774 331 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 ERLEC1P1-201ENST00000433806 578 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.32□□□□□ -2.04
PRPF39Q86UA1 PRELID3BP1-201ENST00000457142 540 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 U8.21-201ENST00000459536 136 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 AC008628.2-201ENST00000502605 298 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.32□□□□□ -2.04
PRPF39Q86UA1 RPL39P5-202ENST00000512505 151 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 AP005597.4-201ENST00000526762 229 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms