Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.05□□□□□ -2.4
CSMD3Q7Z407 RPS3AP1-201ENST00000413190 320 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.05□□□□□ -2.4
CSMD3Q7Z407 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.05□□□□□ -2.4
CSMD3Q7Z407 RAB28P5-201ENST00000427490 651 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 RAB11AP1-201ENST00000442978 646 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC016717.1-201ENST00000448918 286 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 GAPDHP17-201ENST00000449858 1001 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC092001.1-201ENST00000453012 261 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC008628.1-201ENST00000508663 265 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 RNU6-714P-201ENST00000516963 103 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC008088.1-201ENST00000580993 280 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC097065.2-201ENST00000608159 533 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC021506.2-201ENST00000612354 169 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
CSMD3Q7Z407 MTND4P21-201ENST00000453886 1357 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 SNORD114-24-201ENST00000365029 72 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 AL451046.2-201ENST00000403074 277 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 FCF1P6-201ENST00000456841 595 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 snoU13.25-201ENST00000458945 104 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 AC026410.2-201ENST00000460281 156 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 MIR378F-201ENST00000578143 78 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 AL513534.2-201ENST00000603836 250 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 AC090625.1-201ENST00000357130 210 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 RNU6-945P-201ENST00000383947 107 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 RNU6-432P-201ENST00000384196 109 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 Y_RNA.495-201ENST00000384435 112 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 MIR520A-201ENST00000384862 85 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 RPL31P54-201ENST00000429803 370 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 AC025465.4-201ENST00000513422 638 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 SNORD60.2-201ENST00000516883 86 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 7SK.10-201ENST00000621414 298 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 MIR4315-1-201ENST00000636800 73 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 MIR4315-2-201ENST00000640925 73 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 RNU6-1210P-201ENST00000363775 107 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 MIR301A-201ENST00000385261 86 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 CETN4P-201ENST00000432407 469 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 MTND1P28-201ENST00000435623 950 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 RNU4-54P-201ENST00000516428 129 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 RNA5SP437-201ENST00000517249 129 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 RSL24D1P11-201ENST00000591045 491 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 MIR3976-201ENST00000606807 139 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 AC100810.6-201ENST00000638068 285 ntBASIC0.04□□□□□ -2.4
CSMD3Q7Z407 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.04□□□□□ -2.4
CSMD3Q7Z407 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
CSMD3Q7Z407 RNU6-28P-201ENST00000362378 107 ntBASIC0.03□□□□□ -2.4
CSMD3Q7Z407 RNU6-654P-201ENST00000364373 107 ntBASIC0.03□□□□□ -2.4
CSMD3Q7Z407 RNU6-1274P-201ENST00000384557 107 ntBASIC0.03□□□□□ -2.4
CSMD3Q7Z407 Y_RNA.551-201ENST00000384661 102 ntBASIC0.03□□□□□ -2.4
CSMD3Q7Z407 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.03□□□□□ -2.4
CSMD3Q7Z407 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.03□□□□□ -2.4
CSMD3Q7Z407 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
CSMD3Q7Z407 AP003392.2-201ENST00000527269 208 ntBASIC0.03□□□□□ -2.4
CSMD3Q7Z407 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
CSMD3Q7Z407 SNORD49B-201ENST00000365172 72 ntBASIC0.03□□□□□ -2.4
CSMD3Q7Z407 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
CSMD3Q7Z407 SNORD99-201ENST00000408612 74 ntBASIC0.03□□□□□ -2.4
CSMD3Q7Z407 AC244098.3-201ENST00000424803 96 ntBASIC0.03□□□□□ -2.4
CSMD3Q7Z407 FABP5P4-201ENST00000437203 171 ntBASIC0.03□□□□□ -2.4
CSMD3Q7Z407 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.03□□□□□ -2.4
CSMD3Q7Z407 AC023824.3-201ENST00000569003 562 ntBASIC0.03□□□□□ -2.4
CSMD3Q7Z407 AL596245.1-201ENST00000618994 362 ntBASIC0.03□□□□□ -2.4
CSMD3Q7Z407 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.03□□□□□ -2.4
CSMD3Q7Z407 MIR1248-201ENST00000629190 106 ntBASIC0.03□□□□□ -2.4
CSMD3Q7Z407 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.03□□□□□ -2.41
CSMD3Q7Z407 Y_RNA.124-201ENST00000363339 93 ntBASIC0.03□□□□□ -2.41
CSMD3Q7Z407 MIR16-1-201ENST00000385271 89 ntBASIC0.03□□□□□ -2.41
CSMD3Q7Z407 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.03□□□□□ -2.41
CSMD3Q7Z407 AC068533.2-201ENST00000411872 306 ntBASIC0.03□□□□□ -2.41
CSMD3Q7Z407 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.03□□□□□ -2.41
CSMD3Q7Z407 MTND4P25-201ENST00000441039 533 ntBASIC0.03□□□□□ -2.41
CSMD3Q7Z407 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.03□□□□□ -2.41
CSMD3Q7Z407 AC020550.1-201ENST00000447385 163 ntBASIC0.03□□□□□ -2.41
CSMD3Q7Z407 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.03□□□□□ -2.41
CSMD3Q7Z407 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.03□□□□□ -2.41
CSMD3Q7Z407 AC009950.2-201ENST00000636548 183 ntBASIC0.03□□□□□ -2.41
CSMD3Q7Z407 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.41
CSMD3Q7Z407 CASC19-280ENST00000642102 1351 ntBASIC0.03□□□□□ -2.41
CSMD3Q7Z407 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.02□□□□□ -2.41
CSMD3Q7Z407 RNU6-658P-201ENST00000384606 106 ntBASIC0.02□□□□□ -2.41
CSMD3Q7Z407 TPMTP2-201ENST00000414372 726 ntBASIC0.02□□□□□ -2.41
CSMD3Q7Z407 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.02□□□□□ -2.41
CSMD3Q7Z407 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms