Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AC016911.1-201ENST00000613297 452 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 AL159153.1-201ENST00000619688 317 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 AC112204.3-201ENST00000623822 332 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 AC106858.1-201ENST00000637497 429 ntBASIC0.32□□□□□ -2.36
CCDC171Q6TFL3 RNU4-79P-201ENST00000362764 141 ntBASIC0.31□□□□□ -2.36
CCDC171Q6TFL3 AL079342.2-201ENST00000403367 482 ntBASIC0.31□□□□□ -2.36
CCDC171Q6TFL3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.31□□□□□ -2.36
CCDC171Q6TFL3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC171Q6TFL3 AC098869.1-201ENST00000481627 292 ntBASIC0.31□□□□□ -2.36
CCDC171Q6TFL3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC171Q6TFL3 AC087897.1-201ENST00000550134 156 ntBASIC0.31□□□□□ -2.36
CCDC171Q6TFL3 AC091489.2-201ENST00000566263 604 ntBASIC0.31□□□□□ -2.36
CCDC171Q6TFL3 ZNF92P2-201ENST00000600543 1059 ntBASIC0.31□□□□□ -2.36
CCDC171Q6TFL3 AC023932.2-201ENST00000603176 175 ntBASIC0.31□□□□□ -2.36
CCDC171Q6TFL3 AL445435.1-201ENST00000604232 665 ntBASIC0.31□□□□□ -2.36
CCDC171Q6TFL3 MIR3976-201ENST00000606807 139 ntBASIC0.31□□□□□ -2.36
CCDC171Q6TFL3 MIR6516-201ENST00000630554 81 ntBASIC0.31□□□□□ -2.36
CCDC171Q6TFL3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.31□□□□□ -2.36
CCDC171Q6TFL3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 RNU5B-1-201ENST00000363286 116 ntBASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 SNORD116-20-201ENST00000384529 92 ntBASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 AC013262.1-201ENST00000426710 252 ntBASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 LARP1BP3-201ENST00000437229 869 ntBASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 AC079776.3-201ENST00000450665 370 ntBASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 RNU7-59P-201ENST00000459101 61 ntBASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 RNU6-64P-201ENST00000517119 105 ntBASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 AC091163.3-201ENST00000518269 1144 ntBASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 MTND1P36-201ENST00000522384 936 ntBASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 AL590705.4-201ENST00000532209 134 ntBASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 MIR4293-201ENST00000584305 78 ntBASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 AL358072.1-201ENST00000604156 575 ntBASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 AL353765.1-201ENST00000605514 183 ntBASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.3□□□□□ -2.36
CCDC171Q6TFL3 MIR19A-201ENST00000384878 82 ntBASIC0.29□□□□□ -2.36
CCDC171Q6TFL3 AL590556.1-201ENST00000423231 483 ntBASIC0.29□□□□□ -2.36
CCDC171Q6TFL3 MTCYBP5-201ENST00000423752 1135 ntBASIC0.29□□□□□ -2.36
CCDC171Q6TFL3 SNRPEP8-201ENST00000442866 260 ntBASIC0.29□□□□□ -2.36
CCDC171Q6TFL3 AC073910.1-201ENST00000445047 438 ntBASIC0.29□□□□□ -2.36
CCDC171Q6TFL3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.29□□□□□ -2.36
CCDC171Q6TFL3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.29□□□□□ -2.36
CCDC171Q6TFL3 SNORA31.2-201ENST00000516019 134 ntBASIC0.29□□□□□ -2.36
CCDC171Q6TFL3 RNA5SP255-201ENST00000516370 107 ntBASIC0.29□□□□□ -2.36
CCDC171Q6TFL3 AP001893.2-201ENST00000526949 202 ntBASIC0.29□□□□□ -2.36
CCDC171Q6TFL3 MIR1273C-201ENST00000578669 77 ntBASIC0.29□□□□□ -2.36
CCDC171Q6TFL3 AC007363.1-201ENST00000604736 620 ntBASIC0.29□□□□□ -2.36
CCDC171Q6TFL3 AL355816.2-201ENST00000610049 647 ntBASIC0.29□□□□□ -2.36
CCDC171Q6TFL3 RNU6-222P-201ENST00000362438 107 ntBASIC0.28□□□□□ -2.36
CCDC171Q6TFL3 SNORD3E-201ENST00000362899 217 ntBASIC0.28□□□□□ -2.36
CCDC171Q6TFL3 AC068533.2-201ENST00000411872 306 ntBASIC0.28□□□□□ -2.36
CCDC171Q6TFL3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.28□□□□□ -2.36
CCDC171Q6TFL3 AL365338.1-201ENST00000422282 858 ntBASIC0.28□□□□□ -2.36
CCDC171Q6TFL3 MTCO1P3-201ENST00000429327 192 ntBASIC0.28□□□□□ -2.36
CCDC171Q6TFL3 AL591704.1-201ENST00000432574 275 ntBASIC0.28□□□□□ -2.36
CCDC171Q6TFL3 AL008629.1-201ENST00000438615 184 ntBASIC0.28□□□□□ -2.36
CCDC171Q6TFL3 AC048334.1-201ENST00000477975 159 ntBASIC0.28□□□□□ -2.36
CCDC171Q6TFL3 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
CCDC171Q6TFL3 AC024589.1-201ENST00000512207 263 ntBASIC0.28□□□□□ -2.36
CCDC171Q6TFL3 AC105148.1-201ENST00000604961 409 ntBASIC0.28□□□□□ -2.36
CCDC171Q6TFL3 AL158163.2-201ENST00000619110 700 ntBASIC0.28□□□□□ -2.36
CCDC171Q6TFL3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.28□□□□□ -2.36
CCDC171Q6TFL3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 RNA5SP457-201ENST00000363657 124 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 RNU6-1284P-201ENST00000363701 100 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 RNU4-67P-201ENST00000364569 141 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 Y_RNA.534-201ENST00000384599 112 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 MIR625-201ENST00000385047 85 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 MIR942-201ENST00000401111 86 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 RNA5SP111-201ENST00000411386 101 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 COX6CP10-201ENST00000416832 224 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 RAB28P5-201ENST00000427490 651 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 ZFAND6P1-201ENST00000434138 605 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 MTCO3P18-201ENST00000440206 761 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 AC003071.1-201ENST00000451219 789 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 MTCO3P7-201ENST00000510008 774 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 AC005741.1-201ENST00000511094 432 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 SNORD79.1-201ENST00000516069 84 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 RNU6-150P-201ENST00000516237 95 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 RNU6-1315P-201ENST00000517187 99 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 SUMO2P16-201ENST00000519475 264 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 BNIP3P6-201ENST00000549284 499 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 AC068620.3-201ENST00000602749 560 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 Z83818.1-201ENST00000603584 150 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 OR4H6P-202ENST00000603819 340 ntBASIC0.27□□□□□ -2.37
CCDC171Q6TFL3 RNU6-289P-201ENST00000364093 107 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 SNORD32B-201ENST00000364460 84 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 RNU6-945P-201ENST00000383947 107 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 RNU6-817P-201ENST00000391083 104 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 FCF1P10-201ENST00000407590 479 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 RNU6-1054P-201ENST00000411293 104 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 ARL5AP1-201ENST00000418991 388 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 MTCO3P29-201ENST00000432119 779 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 MTCO3P43-201ENST00000440974 771 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 RNU6-953P-201ENST00000459154 107 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 MTCO3P28-201ENST00000513351 515 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 RNU5F-2P-201ENST00000516066 82 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms