Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RPS20P10-201ENST00000451209 253 ntBASIC4.08□□□□□ -1.76
RNF43Q68DV7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RNF43Q68DV7 RPL31P13-201ENST00000484151 370 ntBASIC4.08□□□□□ -1.76
RNF43Q68DV7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.08□□□□□ -1.76
RNF43Q68DV7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.08□□□□□ -1.76
RNF43Q68DV7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.08□□□□□ -1.76
RNF43Q68DV7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.08□□□□□ -1.76
RNF43Q68DV7 AC022616.8-201ENST00000533569 253 ntBASIC4.08□□□□□ -1.76
RNF43Q68DV7 SNORD84-203ENST00000584275 78 ntBASIC4.08□□□□□ -1.76
RNF43Q68DV7 AC110741.2-201ENST00000605278 268 ntBASIC4.08□□□□□ -1.76
RNF43Q68DV7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.08□□□□□ -1.76
RNF43Q68DV7 AC027309.3-201ENST00000623419 351 ntBASIC4.08□□□□□ -1.76
RNF43Q68DV7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RNF43Q68DV7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RNF43Q68DV7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RNF43Q68DV7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF43Q68DV7 UBE3AP2-201ENST00000429033 2259 ntBASIC4.07□□□□□ -1.76
RNF43Q68DV7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.07□□□□□ -1.76
RNF43Q68DV7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF43Q68DV7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF43Q68DV7 RNU6-137P-201ENST00000363680 108 ntBASIC4.07□□□□□ -1.76
RNF43Q68DV7 RNA5SP72-201ENST00000364442 117 ntBASIC4.07□□□□□ -1.76
RNF43Q68DV7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF43Q68DV7 AC098614.2-201ENST00000426040 255 ntBASIC4.07□□□□□ -1.76
RNF43Q68DV7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF43Q68DV7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF43Q68DV7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.07□□□□□ -1.76
RNF43Q68DV7 CYCTP-201ENST00000504253 315 ntBASIC4.07□□□□□ -1.76
RNF43Q68DV7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF43Q68DV7 MIR4431-201ENST00000579990 94 ntBASIC4.07□□□□□ -1.76
RNF43Q68DV7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF43Q68DV7 DEFB117-201ENST00000602356 141 ntBASIC4.07□□□□□ -1.76
RNF43Q68DV7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
RNF43Q68DV7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RNF43Q68DV7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.07□□□□□ -1.76
RNF43Q68DV7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF43Q68DV7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
RNF43Q68DV7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
RNF43Q68DV7 AL365440.1-201ENST00000436135 2167 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF43Q68DV7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF43Q68DV7 DEFB108F-201ENST00000344638 222 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 Y_RNA.111-201ENST00000363248 100 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 SNORD35B-201ENST00000363660 87 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 RNU6-899P-201ENST00000363947 107 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 RNU6-173P-201ENST00000364215 104 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 Y_RNA.420-201ENST00000384043 110 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 MIR30B-201ENST00000384850 88 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 RNY4P18-201ENST00000391107 89 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 MTHFD2P2-201ENST00000407725 247 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 Y_RNA.595-201ENST00000410403 105 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 Z92545.1-201ENST00000411782 234 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF43Q68DV7 Y_RNA.637-201ENST00000459424 114 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 RNU1-95P-201ENST00000516357 160 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 RNU1-128P-201ENST00000516704 160 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF43Q68DV7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF43Q68DV7 DNAJC19P2-201ENST00000593340 302 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 AC091167.4-201ENST00000605079 184 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 AL138963.2-201ENST00000605137 226 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 U7.8-201ENST00000619968 63 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 SNORA43.4-201ENST00000629559 138 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF43Q68DV7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF43Q68DV7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
RNF43Q68DV7 CUL1P1-201ENST00000509510 2425 ntBASIC4.06□□□□□ -1.76
RNF43Q68DV7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RNF43Q68DV7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF43Q68DV7 SRP72P2-201ENST00000344851 1979 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNF43Q68DV7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF43Q68DV7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF43Q68DV7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RNF43Q68DV7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF43Q68DV7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF43Q68DV7 RNU6-898P-201ENST00000365627 104 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 RNU6-142P-201ENST00000384019 107 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 U1.1-201ENST00000384101 164 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 SNORA5A-201ENST00000384111 134 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 MIR199A2-201ENST00000385289 110 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 U3.19-201ENST00000390893 196 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 PTMAP5-201ENST00000393073 333 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 NDUFB4P4-201ENST00000404822 243 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 RNA5SP31-201ENST00000411144 127 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF43Q68DV7 AC074290.1-201ENST00000448883 135 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF43Q68DV7 RNA5SP179-201ENST00000517284 121 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 ZNF192P1-203ENST00000565888 810 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 AC024153.1-201ENST00000603103 365 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 U6.99-201ENST00000637524 83 ntBASIC4.05□□□□□ -1.76
RNF43Q68DV7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RNF43Q68DV7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNF43Q68DV7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF43Q68DV7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF43Q68DV7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF43Q68DV7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
RNF43Q68DV7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF43Q68DV7 SNORD32A-201ENST00000364805 84 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms