Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF20Q5VTR2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF20Q5VTR2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF20Q5VTR2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
RNF20Q5VTR2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RNF20Q5VTR2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF20Q5VTR2 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF20Q5VTR2 Y_RNA.121-201ENST00000363309 113 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 RNU6-324P-201ENST00000363957 106 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 SNORD20-201ENST00000384550 80 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 MIR569-201ENST00000385228 96 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 RNU6-1248P-201ENST00000391096 64 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 SNORA26.3-201ENST00000391119 136 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 RNA5SP239-201ENST00000410218 129 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 Y_RNA.625-201ENST00000411256 107 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 TBCAP1-201ENST00000436520 327 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF20Q5VTR2 U8.19-201ENST00000459095 133 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 Y_RNA.797-201ENST00000515977 94 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 RNU6-928P-201ENST00000516876 104 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 RNA5SP143-201ENST00000516936 115 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.66□□□□□ -1.66
RNF20Q5VTR2 TGIF1P1-201ENST00000558095 802 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF20Q5VTR2 uc_338.32-201ENST00000615087 172 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF20Q5VTR2 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF20Q5VTR2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.66□□□□□ -1.66
RNF20Q5VTR2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF20Q5VTR2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF20Q5VTR2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RNF20Q5VTR2 ADAM3A-203ENST00000461344 2157 ntBASIC4.65□□□□□ -1.66
RNF20Q5VTR2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RNF20Q5VTR2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RNF20Q5VTR2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RNF20Q5VTR2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.65□□□□□ -1.66
RNF20Q5VTR2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
RNF20Q5VTR2 AL133383.2-201ENST00000622958 2336 ntBASIC4.65□□□□□ -1.66
RNF20Q5VTR2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF20Q5VTR2 MIR423-201ENST00000362201 94 ntBASIC4.65□□□□□ -1.67
RNF20Q5VTR2 RNA5SP189-201ENST00000364920 115 ntBASIC4.65□□□□□ -1.67
RNF20Q5VTR2 RNU6-763P-201ENST00000390865 106 ntBASIC4.65□□□□□ -1.67
RNF20Q5VTR2 RNA5SP317-201ENST00000410176 116 ntBASIC4.65□□□□□ -1.67
RNF20Q5VTR2 RNA5SP311-201ENST00000411290 116 ntBASIC4.65□□□□□ -1.67
RNF20Q5VTR2 Y_RNA.629-201ENST00000411368 105 ntBASIC4.65□□□□□ -1.67
RNF20Q5VTR2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF20Q5VTR2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF20Q5VTR2 AP000873.1-201ENST00000463987 400 ntBASIC4.65□□□□□ -1.67
RNF20Q5VTR2 AC007215.1-201ENST00000464893 276 ntBASIC4.65□□□□□ -1.67
RNF20Q5VTR2 PPIAP15-201ENST00000479662 484 ntBASIC4.65□□□□□ -1.67
RNF20Q5VTR2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF20Q5VTR2 AC005840.1-201ENST00000498412 377 ntBASIC4.65□□□□□ -1.67
RNF20Q5VTR2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNF20Q5VTR2 AC005921.1-201ENST00000510589 286 ntBASIC4.65□□□□□ -1.67
RNF20Q5VTR2 RNA5SP315-201ENST00000516340 116 ntBASIC4.65□□□□□ -1.67
RNF20Q5VTR2 RNA5SP312-201ENST00000517068 116 ntBASIC4.65□□□□□ -1.67
RNF20Q5VTR2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF20Q5VTR2 AC009127.3-201ENST00000570531 403 ntBASIC4.65□□□□□ -1.67
RNF20Q5VTR2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF20Q5VTR2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF20Q5VTR2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF20Q5VTR2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
RNF20Q5VTR2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF20Q5VTR2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF20Q5VTR2 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF20Q5VTR2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF20Q5VTR2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF20Q5VTR2 Y_RNA.261-201ENST00000364631 102 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 RNA5SP97-201ENST00000365006 84 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 RNA5SP167-201ENST00000365461 116 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 MIR199A2-201ENST00000385289 110 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 RHEBP3-201ENST00000411920 351 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 CR769767.1-201ENST00000436337 346 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 HMGN2P10-201ENST00000448085 265 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 TPT1P12-201ENST00000448968 492 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 AL645939.1-201ENST00000453429 797 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 RPL26P9-201ENST00000457466 433 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 AC010409.1-201ENST00000487382 476 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF20Q5VTR2 RN7SKP289-201ENST00000517244 295 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 AC090897.2-201ENST00000581715 130 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 AC006380.1-201ENST00000603598 186 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 MIR378J-201ENST00000611988 109 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 USP8P1-201ENST00000494673 3183 ntBASIC4.64□□□□□ -1.67
RNF20Q5VTR2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF20Q5VTR2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RNF20Q5VTR2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF20Q5VTR2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RNF20Q5VTR2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF20Q5VTR2 EI24P2-201ENST00000397776 1076 ntBASIC4.63□□□□□ -1.67
RNF20Q5VTR2 MIR208B-201ENST00000401172 77 ntBASIC4.63□□□□□ -1.67
RNF20Q5VTR2 AC096649.2-201ENST00000416186 393 ntBASIC4.63□□□□□ -1.67
RNF20Q5VTR2 AC008267.6-201ENST00000441664 139 ntBASIC4.63□□□□□ -1.67
RNF20Q5VTR2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF20Q5VTR2 RNU6-107P-201ENST00000516643 102 ntBASIC4.63□□□□□ -1.67
RNF20Q5VTR2 RNA5SP468-201ENST00000516782 93 ntBASIC4.63□□□□□ -1.67
RNF20Q5VTR2 AC021739.1-201ENST00000559631 174 ntBASIC4.63□□□□□ -1.67
RNF20Q5VTR2 AC090877.1-201ENST00000561418 344 ntBASIC4.63□□□□□ -1.67
RNF20Q5VTR2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms