Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ALFQ53S48 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ALFQ53S48 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
ALFQ53S48 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
ALFQ53S48 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
ALFQ53S48 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.6□□□□□ -1.99
ALFQ53S48 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ALFQ53S48 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.6□□□□□ -1.99
ALFQ53S48 SNORD113-7-201ENST00000363762 77 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 RNU6-877P-201ENST00000383868 107 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 RNU6-128P-201ENST00000383976 107 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 Y_RNA.450-201ENST00000384198 113 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 MIR27B-201ENST00000385129 97 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 SNORA12-201ENST00000391162 147 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 MTCYBP2-201ENST00000407745 171 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.6□□□□□ -1.99
ALFQ53S48 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.6□□□□□ -1.99
ALFQ53S48 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.6□□□□□ -1.99
ALFQ53S48 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.6□□□□□ -1.99
ALFQ53S48 AMD1P1-201ENST00000457220 922 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 AC055731.1-201ENST00000474387 401 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.6□□□□□ -1.99
ALFQ53S48 MTCO1P29-201ENST00000496868 288 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 TRBVA-201ENST00000498804 316 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 RN7SKP24-201ENST00000515888 284 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 RNA5SP82-201ENST00000516707 92 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 MTND1P5-201ENST00000517906 940 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.6□□□□□ -1.99
ALFQ53S48 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.6□□□□□ -1.99
ALFQ53S48 Z98751.3-201ENST00000604447 521 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 FAM157A-202ENST00000615155 405 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.6□□□□□ -1.99
ALFQ53S48 AC243829.7-201ENST00000633081 225 ntBASIC2.6□□□□□ -1.99
ALFQ53S48 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ALFQ53S48 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ALFQ53S48 RNU6-254P-201ENST00000363377 107 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 U3.9-201ENST00000363823 204 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 SNORD32B-201ENST00000364460 84 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 SNORD14D-201ENST00000384390 87 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 Y_RNA.530-201ENST00000384587 101 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 MIR518C-201ENST00000384822 101 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 AL355497.1-201ENST00000406262 551 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 AC009963.1-201ENST00000417265 157 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.59□□□□□ -1.99
ALFQ53S48 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.59□□□□□ -1.99
ALFQ53S48 PTP4A1P4-201ENST00000512479 322 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.59□□□□□ -1.99
ALFQ53S48 AC109446.1-201ENST00000566172 220 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 CYP4A27P-201ENST00000567218 190 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.59□□□□□ -1.99
ALFQ53S48 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.59□□□□□ -1.99
ALFQ53S48 AL136221.1-201ENST00000621449 509 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 MIR1248-201ENST00000629190 106 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 SNORA43.4-201ENST00000629559 138 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 AC024614.3-201ENST00000637860 256 ntBASIC2.59□□□□□ -1.99
ALFQ53S48 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
ALFQ53S48 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ALFQ53S48 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ALFQ53S48 SNORA25.6-201ENST00000364121 118 ntBASIC2.58□□□□□ -2
ALFQ53S48 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.58□□□□□ -2
ALFQ53S48 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ALFQ53S48 MIR518A2-201ENST00000384966 87 ntBASIC2.58□□□□□ -2
ALFQ53S48 RNU6-332P-201ENST00000391193 108 ntBASIC2.58□□□□□ -2
ALFQ53S48 AL357139.1-201ENST00000407792 426 ntBASIC2.58□□□□□ -2
ALFQ53S48 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.58□□□□□ -2
ALFQ53S48 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.58□□□□□ -2
ALFQ53S48 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.58□□□□□ -2
ALFQ53S48 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.58□□□□□ -2
ALFQ53S48 AL078605.1-201ENST00000603529 500 ntBASIC2.58□□□□□ -2
ALFQ53S48 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.58□□□□□ -2
ALFQ53S48 AC068137.4-201ENST00000638485 296 ntBASIC2.58□□□□□ -2
ALFQ53S48 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.58□□□□□ -2
ALFQ53S48 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ALFQ53S48 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
ALFQ53S48 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.57□□□□□ -2
ALFQ53S48 Y_RNA.100-201ENST00000363141 102 ntBASIC2.57□□□□□ -2
ALFQ53S48 RNU6-26P-201ENST00000383985 107 ntBASIC2.57□□□□□ -2
ALFQ53S48 SNORA36A-201ENST00000384221 132 ntBASIC2.57□□□□□ -2
ALFQ53S48 Y_RNA.500-201ENST00000384466 111 ntBASIC2.57□□□□□ -2
ALFQ53S48 MIR1262-201ENST00000408276 93 ntBASIC2.57□□□□□ -2
ALFQ53S48 RNA5SP201-201ENST00000410316 124 ntBASIC2.57□□□□□ -2
ALFQ53S48 RNU6-325P-201ENST00000411132 105 ntBASIC2.57□□□□□ -2
ALFQ53S48 AL030996.1-201ENST00000411430 235 ntBASIC2.57□□□□□ -2
ALFQ53S48 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.57□□□□□ -2
ALFQ53S48 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.57□□□□□ -2
ALFQ53S48 AC007547.1-201ENST00000462177 490 ntBASIC2.57□□□□□ -2
ALFQ53S48 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.57□□□□□ -2
ALFQ53S48 ANXA2P1-201ENST00000505539 926 ntBASIC2.57□□□□□ -2
ALFQ53S48 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.57□□□□□ -2
ALFQ53S48 RNU6-991P-201ENST00000516168 107 ntBASIC2.57□□□□□ -2
ALFQ53S48 AC016256.1-201ENST00000547971 354 ntBASIC2.57□□□□□ -2
ALFQ53S48 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.57□□□□□ -2
ALFQ53S48 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.57□□□□□ -2
ALFQ53S48 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.57□□□□□ -2
ALFQ53S48 AC104458.1-201ENST00000608243 463 ntBASIC2.57□□□□□ -2
ALFQ53S48 AL450472.1-202ENST00000637286 180 ntBASIC2.57□□□□□ -2
ALFQ53S48 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ALFQ53S48 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ALFQ53S48 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 260.7 ms