Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNA5SP494-201ENST00000410653 129 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 AC012306.1-201ENST00000423267 114 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 AL353705.1-201ENST00000433468 480 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 AC146507.2-201ENST00000460608 476 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 AC091179.1-201ENST00000461606 579 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 UBE2DNL-203ENST00000474922 222 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 AC022080.3-201ENST00000544433 482 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 AC104581.2-201ENST00000572227 430 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 MIR3923-201ENST00000579521 83 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 MIR3199-1-201ENST00000582434 88 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 AL034555.1-201ENST00000604816 211 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 RPL23AP88-201ENST00000605759 454 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 MIR1302-2-201ENST00000607096 138 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 AC018692.3-201ENST00000623929 123 ntBASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC144BQ3MJ40 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 MTND5P27-201ENST00000428871 1720 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 Y_RNA.128-201ENST00000363391 112 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 SNORD115-32-201ENST00000364079 82 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 SNORD42.2-201ENST00000365570 69 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 SNORA44-201ENST00000384584 132 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 Y_RNA.577-201ENST00000384794 101 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 RNU6-1328P-201ENST00000410938 106 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 AC007098.1-201ENST00000420122 367 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 AL358453.1-201ENST00000422522 250 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 AL590556.1-201ENST00000423231 483 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 RPS15AP7-201ENST00000439294 405 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 AC099799.1-201ENST00000439809 192 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 RPS3P1-201ENST00000456781 192 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 snoU13.30-201ENST00000458951 104 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 RN7SL75P-201ENST00000461926 281 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 MIR5701-3-201ENST00000578890 82 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 MIR4513-201ENST00000581077 86 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 MIR5701-1-201ENST00000585138 82 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 RPL30P11-203ENST00000598995 310 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 RMST_6.1-201ENST00000611980 203 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 MIR5701-2-201ENST00000615634 82 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 AL450472.1-202ENST00000637286 180 ntBASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC144BQ3MJ40 MTND4P27-201ENST00000450813 1354 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 AC080128.1-201ENST00000474389 1917 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 Y_RNA.395-201ENST00000383945 109 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 RN7SKP220-201ENST00000410611 288 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 AC008267.5-201ENST00000424928 265 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 RPL30P4-201ENST00000429309 333 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 AL353997.1-201ENST00000432936 108 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 AC073901.1-201ENST00000462471 408 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 AC092185.1-201ENST00000491371 97 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 RNA5SP380-201ENST00000517190 98 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 AL442663.2-201ENST00000554385 511 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 CYP4A27P-201ENST00000567218 190 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 AC105245.1-201ENST00000581934 244 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 AL033523.1-201ENST00000605153 153 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 AC134503.1-201ENST00000633048 54 ntBASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC144BQ3MJ40 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 MIR218-1-201ENST00000384999 110 ntBASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 AC005534.2-201ENST00000431047 433 ntBASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 AC087477.1-201ENST00000465747 340 ntBASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 AC023141.11-201ENST00000508864 202 ntBASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 RNU6-1198P-201ENST00000516904 67 ntBASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 AC023442.1-201ENST00000531247 422 ntBASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 MIR2682-201ENST00000580305 110 ntBASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 Z98751.3-201ENST00000604447 521 ntBASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 AC100812.1-201ENST00000607622 580 ntBASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 AL449363.1-201ENST00000617815 186 ntBASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 AC091903.1-201ENST00000624322 454 ntBASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 AL355596.1-201ENST00000565399 3996 ntBASIC3.65□□□□□ -1.83
CCDC144BQ3MJ40 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC144BQ3MJ40 Y_RNA.428-201ENST00000384078 102 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms