Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 GSTA11P-201ENST00000452866 669 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 S100A11P2-201ENST00000467589 312 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 RN7SL283P-201ENST00000489055 303 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 AC008885.1-201ENST00000514930 301 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 RNU7-175P-201ENST00000515915 61 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 AC144568.1-201ENST00000520139 137 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 AC022080.3-201ENST00000544433 482 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 AC004584.2-201ENST00000570407 410 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 MIR5571-201ENST00000577998 113 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 RPS15AP11-201ENST00000594193 385 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 AC116312.1-201ENST00000606841 314 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 AC007485.1-201ENST00000616755 206 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 AL159153.1-201ENST00000619688 317 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 SCARNA4-201ENST00000629045 128 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 AL606534.2-204ENST00000635008 178 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 MIR622-201ENST00000638396 96 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 Y_RNA.314-201ENST00000365114 102 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 SNORA26.3-201ENST00000391119 136 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 RNA5SP494-201ENST00000410653 129 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 RN7SL75P-201ENST00000461926 281 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 AP001486.1-201ENST00000463339 476 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 RN7SL20P-201ENST00000488827 297 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 RPL23AP75-201ENST00000491601 451 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 AC091874.1-201ENST00000511402 339 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 SCARNA13-201ENST00000516672 275 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 RNU4-77P-201ENST00000516692 156 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 HSPE1P4-201ENST00000550617 308 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 RPL23AP88-201ENST00000605759 454 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 AC137590.2-201ENST00000619709 240 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 AC006386.2-201ENST00000624491 75 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 AC012005.1-201ENST00000624575 75 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 SNORA43.4-201ENST00000629559 138 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 AC110079.1-202ENST00000635213 138 ntBASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
PTCHD3Q3KNS1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 AP003122.5-201ENST00000527668 3766 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 RNU5B-2P-201ENST00000363036 113 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 SNORD114-19-201ENST00000363072 75 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 SNORD115-32-201ENST00000364079 82 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 MIR634-201ENST00000385208 97 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 SNORA12.2-201ENST00000391040 156 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 RPL21P3-201ENST00000395517 478 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 AL358453.1-201ENST00000422522 250 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 AL358075.3-201ENST00000426289 226 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 AC244670.1-201ENST00000436879 112 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 UQCRHP3-201ENST00000451503 251 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 snoU13.30-201ENST00000458951 104 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 snoU13.14-201ENST00000459372 104 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 AC146507.2-201ENST00000460608 476 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 AL049873.1-201ENST00000480540 376 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 AC015911.1-201ENST00000495111 156 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 AC105758.1-201ENST00000506038 399 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 MRPS36P4-201ENST00000534436 298 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 AC007375.1-201ENST00000554513 578 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 AC021231.3-201ENST00000558497 370 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 AC100812.1-201ENST00000607622 580 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 RMST_6.1-201ENST00000611980 203 ntBASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.97□□□□□ -1.93
PTCHD3Q3KNS1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 SNORA29-201ENST00000384183 140 ntBASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 MIR190B-201ENST00000401119 79 ntBASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 AC009414.1-201ENST00000427200 443 ntBASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 AL353705.4-201ENST00000449661 238 ntBASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 RPL30P12-201ENST00000474666 353 ntBASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 RPL30P1-201ENST00000488676 339 ntBASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 RNU6-911P-201ENST00000516523 104 ntBASIC2.96□□□□□ -1.94
PTCHD3Q3KNS1 SNORA40.14-201ENST00000516543 86 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms