Protein–RNA interactions for Protein: Q38SD2

LRRK1, Leucine-rich repeat serine/threonine-protein kinase 1, humanhuman

Predictions only

Length 2,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1Q38SD2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
LRRK1Q38SD2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LRRK1Q38SD2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
LRRK1Q38SD2 Y_RNA.167-201ENST00000363735 109 ntBASIC1.9□□□□□ -2.11
LRRK1Q38SD2 RNU6-457P-201ENST00000363999 107 ntBASIC1.9□□□□□ -2.11
LRRK1Q38SD2 RNU6-534P-201ENST00000364877 106 ntBASIC1.9□□□□□ -2.11
LRRK1Q38SD2 RNU6-933P-201ENST00000384424 107 ntBASIC1.9□□□□□ -2.11
LRRK1Q38SD2 RNU6-1222P-201ENST00000384615 107 ntBASIC1.9□□□□□ -2.11
LRRK1Q38SD2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.9□□□□□ -2.11
LRRK1Q38SD2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.9□□□□□ -2.11
LRRK1Q38SD2 IFNA20P-201ENST00000436840 528 ntBASIC1.9□□□□□ -2.11
LRRK1Q38SD2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.9□□□□□ -2.11
LRRK1Q38SD2 AC243964.1-201ENST00000441814 261 ntBASIC1.9□□□□□ -2.11
LRRK1Q38SD2 RPS29P25-201ENST00000481709 171 ntBASIC1.9□□□□□ -2.11
LRRK1Q38SD2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.9□□□□□ -2.11
LRRK1Q38SD2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.9□□□□□ -2.11
LRRK1Q38SD2 AC103996.1-201ENST00000555468 102 ntBASIC1.9□□□□□ -2.11
LRRK1Q38SD2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.9□□□□□ -2.11
LRRK1Q38SD2 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.9□□□□□ -2.11
LRRK1Q38SD2 AC103705.1-201ENST00000619013 241 ntBASIC1.9□□□□□ -2.11
LRRK1Q38SD2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
LRRK1Q38SD2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
LRRK1Q38SD2 AC138393.1-203ENST00000327086 343 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 RNU6-451P-201ENST00000362921 107 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 RNY1P10-201ENST00000363268 113 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 RNU6-715P-201ENST00000365204 103 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 Y_RNA.372-201ENST00000365599 102 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 Y_RNA.409-201ENST00000383990 98 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 RPL21P75-201ENST00000396599 483 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 RPL21P28-201ENST00000401418 483 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 RNA5SP118-201ENST00000410385 109 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.89□□□□□ -2.11
LRRK1Q38SD2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.89□□□□□ -2.11
LRRK1Q38SD2 SCARNA18-201ENST00000459004 134 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 RPL21P39-201ENST00000463605 483 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 RPL21P93-201ENST00000480465 489 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 AC093591.1-201ENST00000491435 481 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 RPL21P16-201ENST00000495531 483 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 AC091885.1-201ENST00000506658 268 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.89□□□□□ -2.11
LRRK1Q38SD2 SNORA31.18-201ENST00000517043 134 ntBASIC1.89□□□□□ -2.11
LRRK1Q38SD2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.89□□□□□ -2.11
LRRK1Q38SD2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LRRK1Q38SD2 Y_RNA.89-201ENST00000363031 102 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 Y_RNA.100-201ENST00000363141 102 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 SNORA25.9-201ENST00000365087 128 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 MIR1323-201ENST00000408090 73 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 RNU4-62P-201ENST00000410125 130 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 AL365400.1-201ENST00000431854 640 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 MTCO3P18-201ENST00000440206 761 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 SNORA40.12-201ENST00000516329 111 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 AC104576.1-201ENST00000524225 88 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.88□□□□□ -2.11
LRRK1Q38SD2 PRELID2P1-201ENST00000552837 301 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 MIR5692C1-201ENST00000585309 91 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.88□□□□□ -2.11
LRRK1Q38SD2 AL670379.10-201ENST00000604330 253 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 AL670379.2-201ENST00000604983 252 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 AL670379.9-201ENST00000605428 253 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 AC123912.5-201ENST00000605470 343 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 MIR3529-201ENST00000637713 78 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.88□□□□□ -2.11
LRRK1Q38SD2 AC027514.1-201ENST00000588561 1603 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 Y_RNA.6-201ENST00000362350 114 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 RNU6-487P-201ENST00000365430 104 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 BTF3L4P2-201ENST00000392798 346 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LRRK1Q38SD2 RNA5SP390-201ENST00000410191 113 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 RNA5SP270-201ENST00000411361 118 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 EIF1P1-201ENST00000421436 341 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 MTCO3P46-201ENST00000425787 232 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 ERLEC1P1-201ENST00000433806 578 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 RPL31P41-201ENST00000477967 372 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 RPL22P13-201ENST00000493291 347 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 AC116655.1-201ENST00000508324 901 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 RNU6-567P-201ENST00000516746 107 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.88□□□□□ -2.11
LRRK1Q38SD2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.88□□□□□ -2.11
LRRK1Q38SD2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
LRRK1Q38SD2 AL021997.1-201ENST00000605757 193 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
LRRK1Q38SD2 AC092794.1-201ENST00000612734 582 ntBASIC1.88□□□□□ -2.11
LRRK1Q38SD2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.88□□□□□ -2.11
LRRK1Q38SD2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LRRK1Q38SD2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
LRRK1Q38SD2 MIRLET7G-201ENST00000362280 84 ntBASIC1.87□□□□□ -2.11
LRRK1Q38SD2 MIR337-201ENST00000362281 93 ntBASIC1.87□□□□□ -2.11
LRRK1Q38SD2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LRRK1Q38SD2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.87□□□□□ -2.11
LRRK1Q38SD2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.87□□□□□ -2.11
LRRK1Q38SD2 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.87□□□□□ -2.11
LRRK1Q38SD2 FABP5P14-201ENST00000437273 393 ntBASIC1.87□□□□□ -2.11
LRRK1Q38SD2 MTCO2P3-201ENST00000442543 421 ntBASIC1.87□□□□□ -2.11
LRRK1Q38SD2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.87□□□□□ -2.11
LRRK1Q38SD2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.87□□□□□ -2.11
LRRK1Q38SD2 CCDC34P1-201ENST00000507441 517 ntBASIC1.87□□□□□ -2.11
LRRK1Q38SD2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.87□□□□□ -2.11
LRRK1Q38SD2 Y_RNA.704-201ENST00000516851 102 ntBASIC1.87□□□□□ -2.11
LRRK1Q38SD2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.87□□□□□ -2.11
LRRK1Q38SD2 AC025165.5-201ENST00000602802 578 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms