Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 AL353997.1-201ENST00000432936 108 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 AC092573.2-201ENST00000434546 243 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.35□□□□□ -1.87
SF3B3Q15393 AL031274.1-201ENST00000450334 232 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 AC092798.1-201ENST00000458542 409 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 U8.20-201ENST00000459445 131 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 AC146507.2-201ENST00000460608 476 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 RPL9P9-202ENST00000466501 579 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 FO393415.2-201ENST00000480085 343 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 AC105758.1-201ENST00000506038 399 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 RNA5SP148-201ENST00000516527 94 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 Y_RNA.721-201ENST00000517207 102 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
SF3B3Q15393 AC091544.4-201ENST00000555268 342 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.35□□□□□ -1.87
SF3B3Q15393 MIR4273-201ENST00000582824 84 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 7SK.7-201ENST00000603504 247 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 AC009314.1-201ENST00000603871 304 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 AC004805.2-201ENST00000605382 482 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 PRR13P7-201ENST00000605538 430 ntBASIC3.35□□□□□ -1.87
SF3B3Q15393 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.35□□□□□ -1.87
SF3B3Q15393 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.35□□□□□ -1.87
SF3B3Q15393 RNU6-99P-201ENST00000364721 107 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 Y_RNA.389-201ENST00000383924 113 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 Y_RNA.401-201ENST00000383965 117 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 RNU6-823P-201ENST00000391042 103 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 AL591034.2-201ENST00000402839 359 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 RNU2-68P-201ENST00000410878 191 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 AC114482.1-201ENST00000418010 247 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.34□□□□□ -1.87
SF3B3Q15393 AC092047.1-201ENST00000424997 240 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 RPS15AP10-201ENST00000432472 382 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 SNRPEP9-201ENST00000436794 238 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 RPS29P6-201ENST00000438196 145 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 AC013470.1-201ENST00000453438 462 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 AL353752.1-201ENST00000454946 260 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.34□□□□□ -1.87
SF3B3Q15393 RN7SL75P-201ENST00000461926 281 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 RNA5SP282-201ENST00000516355 108 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 RNU6-572P-201ENST00000516724 80 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 MIR4435-1-201ENST00000582552 80 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 AL161629.2-201ENST00000615347 275 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 U4.1-201ENST00000620349 87 ntBASIC3.34□□□□□ -1.87
SF3B3Q15393 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SF3B3Q15393 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.34□□□□□ -1.88
SF3B3Q15393 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.34□□□□□ -1.88
SF3B3Q15393 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.33□□□□□ -1.88
SF3B3Q15393 RNY1P16-201ENST00000363063 111 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 Y_RNA.176-201ENST00000363815 109 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 RNU6-1156P-201ENST00000410365 100 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.33□□□□□ -1.88
SF3B3Q15393 AC098614.2-201ENST00000426040 255 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.33□□□□□ -1.88
SF3B3Q15393 AL731563.1-201ENST00000442202 214 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 AL078601.1-201ENST00000444542 271 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 HIGD1AP2-201ENST00000446367 280 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 CHEK2P4-201ENST00000450340 246 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 EEF1B2P7-201ENST00000451177 676 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 AC133134.1-201ENST00000466800 359 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.33□□□□□ -1.88
SF3B3Q15393 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.33□□□□□ -1.88
SF3B3Q15393 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.33□□□□□ -1.88
SF3B3Q15393 VN1R107P-201ENST00000601784 209 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 AL158827.2-201ENST00000602494 330 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 AC008121.1-201ENST00000603244 268 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 AL691447.3-201ENST00000635020 330 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 MIR4272-201ENST00000635924 64 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SF3B3Q15393 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SF3B3Q15393 MTND5P7-201ENST00000413558 1798 ntBASIC3.33□□□□□ -1.88
SF3B3Q15393 AC093831.2-201ENST00000624393 3427 ntBASIC3.32□□□□□ -1.88
SF3B3Q15393 Y_RNA.314-201ENST00000365114 102 ntBASIC3.32□□□□□ -1.88
SF3B3Q15393 SET-203ENST00000372688 801 ntTSL 2 BASIC3.32□□□□□ -1.88
SF3B3Q15393 RNU6-26P-201ENST00000383985 107 ntBASIC3.32□□□□□ -1.88
SF3B3Q15393 RNU6-505P-201ENST00000384427 107 ntBASIC3.32□□□□□ -1.88
SF3B3Q15393 Y_RNA.574-201ENST00000384766 95 ntBASIC3.32□□□□□ -1.88
SF3B3Q15393 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SF3B3Q15393 MIR1302-3-201ENST00000408128 138 ntBASIC3.32□□□□□ -1.88
SF3B3Q15393 RNU6-101P-201ENST00000410323 104 ntBASIC3.32□□□□□ -1.88
SF3B3Q15393 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SF3B3Q15393 AC007560.1-201ENST00000426912 237 ntBASIC3.32□□□□□ -1.88
SF3B3Q15393 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.32□□□□□ -1.88
SF3B3Q15393 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.32□□□□□ -1.88
SF3B3Q15393 AC109479.2-201ENST00000517842 174 ntBASIC3.32□□□□□ -1.88
SF3B3Q15393 AC103996.1-201ENST00000555468 102 ntBASIC3.32□□□□□ -1.88
SF3B3Q15393 AC004852.3-201ENST00000614131 326 ntBASIC3.32□□□□□ -1.88
SF3B3Q15393 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SF3B3Q15393 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.32□□□□□ -1.88
SF3B3Q15393 AC008669.1-201ENST00000565823 2178 ntBASIC3.32□□□□□ -1.88
SF3B3Q15393 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.32□□□□□ -1.88
SF3B3Q15393 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SF3B3Q15393 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.32□□□□□ -1.88
SF3B3Q15393 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SF3B3Q15393 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SF3B3Q15393 Y_RNA.106-201ENST00000363189 100 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 RNU6-450P-201ENST00000364654 107 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 RNU4-42P-201ENST00000364738 142 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 Y_RNA.533-201ENST00000384596 114 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 MIR325-201ENST00000385260 98 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms