Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RPS3AP37-201ENST00000419176 745 ntBASIC0.17□□□□□ -2.38
HIST1H1AQ02539 MTND4P20-201ENST00000424125 869 ntBASIC0.17□□□□□ -2.38
HIST1H1AQ02539 AC079776.3-201ENST00000450665 370 ntBASIC0.17□□□□□ -2.38
HIST1H1AQ02539 SNRPGP9-201ENST00000456025 225 ntBASIC0.17□□□□□ -2.38
HIST1H1AQ02539 AL162395.1-201ENST00000457882 422 ntBASIC0.17□□□□□ -2.38
HIST1H1AQ02539 RNU7-34P-201ENST00000459394 64 ntBASIC0.17□□□□□ -2.38
HIST1H1AQ02539 AC091435.1-201ENST00000505442 584 ntBASIC0.17□□□□□ -2.38
HIST1H1AQ02539 RNU6-551P-201ENST00000516661 103 ntBASIC0.17□□□□□ -2.38
HIST1H1AQ02539 HMGN1P30-201ENST00000589286 268 ntBASIC0.17□□□□□ -2.38
HIST1H1AQ02539 AC007363.1-201ENST00000604736 620 ntBASIC0.17□□□□□ -2.38
HIST1H1AQ02539 AC018889.1-201ENST00000605372 397 ntBASIC0.17□□□□□ -2.38
HIST1H1AQ02539 AC006270.3-201ENST00000605967 1036 ntBASIC0.17□□□□□ -2.38
HIST1H1AQ02539 PCMTD1P7-201ENST00000634506 357 ntBASIC0.17□□□□□ -2.38
HIST1H1AQ02539 MTND5P42-201ENST00000637720 498 ntBASIC0.17□□□□□ -2.38
HIST1H1AQ02539 RNU6-438P-201ENST00000365561 103 ntBASIC0.16□□□□□ -2.38
HIST1H1AQ02539 RNU6-348P-201ENST00000384386 107 ntBASIC0.16□□□□□ -2.38
HIST1H1AQ02539 Y_RNA.623-201ENST00000411128 95 ntBASIC0.16□□□□□ -2.38
HIST1H1AQ02539 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.16□□□□□ -2.38
HIST1H1AQ02539 AC011233.1-201ENST00000422812 283 ntBASIC0.16□□□□□ -2.38
HIST1H1AQ02539 AL606662.1-201ENST00000445763 553 ntBASIC0.16□□□□□ -2.38
HIST1H1AQ02539 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.16□□□□□ -2.38
HIST1H1AQ02539 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.16□□□□□ -2.38
HIST1H1AQ02539 AC010468.3-201ENST00000508225 458 ntBASIC0.16□□□□□ -2.38
HIST1H1AQ02539 SUMO2P16-201ENST00000519475 264 ntBASIC0.16□□□□□ -2.38
HIST1H1AQ02539 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.16□□□□□ -2.38
HIST1H1AQ02539 ZNF92P2-201ENST00000600543 1059 ntBASIC0.16□□□□□ -2.38
HIST1H1AQ02539 AL031281.1-201ENST00000604049 488 ntBASIC0.16□□□□□ -2.38
HIST1H1AQ02539 AC009509.4-201ENST00000619202 509 ntBASIC0.16□□□□□ -2.38
HIST1H1AQ02539 AC231657.1-201ENST00000624313 397 ntBASIC0.16□□□□□ -2.38
HIST1H1AQ02539 RNU6-534P-201ENST00000364877 106 ntBASIC0.15□□□□□ -2.39
HIST1H1AQ02539 SNORA4.3-201ENST00000365564 137 ntBASIC0.15□□□□□ -2.39
HIST1H1AQ02539 RNU6-950P-201ENST00000384651 107 ntBASIC0.15□□□□□ -2.39
HIST1H1AQ02539 RNU1-119P-201ENST00000391122 165 ntBASIC0.15□□□□□ -2.39
HIST1H1AQ02539 MTCO2P1-201ENST00000424648 477 ntBASIC0.15□□□□□ -2.39
HIST1H1AQ02539 AL627311.1-201ENST00000431514 115 ntBASIC0.15□□□□□ -2.39
HIST1H1AQ02539 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.15□□□□□ -2.39
HIST1H1AQ02539 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.15□□□□□ -2.39
HIST1H1AQ02539 AC233266.1-201ENST00000454518 96 ntBASIC0.15□□□□□ -2.39
HIST1H1AQ02539 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.15□□□□□ -2.39
HIST1H1AQ02539 RNU6-914P-201ENST00000516749 109 ntBASIC0.15□□□□□ -2.39
HIST1H1AQ02539 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.15□□□□□ -2.39
HIST1H1AQ02539 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.15□□□□□ -2.39
HIST1H1AQ02539 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.15□□□□□ -2.39
HIST1H1AQ02539 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.15□□□□□ -2.39
HIST1H1AQ02539 AL353778.1-201ENST00000603149 408 ntBASIC0.15□□□□□ -2.39
HIST1H1AQ02539 AL513534.2-201ENST00000603836 250 ntBASIC0.15□□□□□ -2.39
HIST1H1AQ02539 AC242852.1-201ENST00000612151 96 ntBASIC0.15□□□□□ -2.39
HIST1H1AQ02539 AC244015.1-201ENST00000622301 99 ntBASIC0.15□□□□□ -2.39
HIST1H1AQ02539 AC112204.3-201ENST00000623822 332 ntBASIC0.15□□□□□ -2.39
HIST1H1AQ02539 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.15□□□□□ -2.39
HIST1H1AQ02539 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.15□□□□□ -2.39
HIST1H1AQ02539 AC083799.1-201ENST00000366451 910 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 SNORA32.2-201ENST00000384049 122 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.14□□□□□ -2.39
HIST1H1AQ02539 AL079342.2-201ENST00000403367 482 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 RPS20P10-201ENST00000451209 253 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.14□□□□□ -2.39
HIST1H1AQ02539 snoU109.2-201ENST00000459316 135 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 RPS26P48-201ENST00000491713 339 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 AC022493.2-201ENST00000506122 481 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 AC010587.2-201ENST00000511727 448 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 MTCO3P28-201ENST00000513351 515 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 RNU6-1225P-201ENST00000516336 65 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 Y_RNA.676-201ENST00000516393 96 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 AC021451.1-201ENST00000523498 1129 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 AC016957.1-201ENST00000534895 309 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.14□□□□□ -2.39
HIST1H1AQ02539 KC877982.1-201ENST00000602313 470 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 AC090186.1-201ENST00000605991 572 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
HIST1H1AQ02539 MIR412-201ENST00000362142 91 ntBASIC0.13□□□□□ -2.39
HIST1H1AQ02539 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
HIST1H1AQ02539 SNORA72.2-201ENST00000365028 127 ntBASIC0.13□□□□□ -2.39
HIST1H1AQ02539 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
HIST1H1AQ02539 RNU6-163P-201ENST00000384396 106 ntBASIC0.13□□□□□ -2.39
HIST1H1AQ02539 RNA5SP193-201ENST00000410353 107 ntBASIC0.13□□□□□ -2.39
HIST1H1AQ02539 AC068533.2-201ENST00000411872 306 ntBASIC0.13□□□□□ -2.39
HIST1H1AQ02539 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.13□□□□□ -2.39
HIST1H1AQ02539 NDUFB1P2-201ENST00000449477 176 ntBASIC0.13□□□□□ -2.39
HIST1H1AQ02539 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.13□□□□□ -2.39
HIST1H1AQ02539 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
HIST1H1AQ02539 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.13□□□□□ -2.39
HIST1H1AQ02539 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.13□□□□□ -2.39
HIST1H1AQ02539 AC115990.1-201ENST00000526957 301 ntBASIC0.13□□□□□ -2.39
HIST1H1AQ02539 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.13□□□□□ -2.39
HIST1H1AQ02539 AC007834.2-201ENST00000536310 343 ntBASIC0.13□□□□□ -2.39
HIST1H1AQ02539 AC069545.1-201ENST00000605671 358 ntBASIC0.13□□□□□ -2.39
HIST1H1AQ02539 AL353149.1-201ENST00000610667 244 ntBASIC0.13□□□□□ -2.39
HIST1H1AQ02539 AC092106.3-201ENST00000611308 722 ntBASIC0.13□□□□□ -2.39
HIST1H1AQ02539 Z69720.2-201ENST00000624755 279 ntBASIC0.13□□□□□ -2.39
HIST1H1AQ02539 CASC19-280ENST00000642102 1351 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 RNU6-853P-201ENST00000364306 107 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 RNU6-1-201ENST00000383898 107 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 SNORA75B-201ENST00000384053 137 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 RNU6-42P-201ENST00000384165 107 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 RNU6-36P-201ENST00000384172 107 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 RNU6-4P-201ENST00000384205 107 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 RNU6-5P-201ENST00000384238 107 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 RNU6-3P-201ENST00000384314 107 ntBASIC0.12□□□□□ -2.39
HIST1H1AQ02539 RNU6-2-201ENST00000384627 107 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms