Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.68□□□□□ -2.14
IRX3P78415 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.68□□□□□ -2.14
IRX3P78415 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.68□□□□□ -2.14
IRX3P78415 AC018868.1-201ENST00000491307 315 ntBASIC1.68□□□□□ -2.14
IRX3P78415 HMGN1P7-201ENST00000491722 313 ntBASIC1.68□□□□□ -2.14
IRX3P78415 AC022447.4-201ENST00000504053 364 ntBASIC1.68□□□□□ -2.14
IRX3P78415 AC098862.1-201ENST00000504991 413 ntBASIC1.68□□□□□ -2.14
IRX3P78415 Y_RNA.675-201ENST00000516389 149 ntBASIC1.68□□□□□ -2.14
IRX3P78415 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.68□□□□□ -2.14
IRX3P78415 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.68□□□□□ -2.14
IRX3P78415 AC135279.1-201ENST00000543493 504 ntBASIC1.68□□□□□ -2.14
IRX3P78415 AC233702.2-202ENST00000562547 291 ntBASIC1.68□□□□□ -2.14
IRX3P78415 MIR4775-201ENST00000581168 75 ntBASIC1.68□□□□□ -2.14
IRX3P78415 MIR548AB-201ENST00000584917 84 ntBASIC1.68□□□□□ -2.14
IRX3P78415 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.68□□□□□ -2.14
IRX3P78415 AL356157.2-201ENST00000605122 111 ntBASIC1.68□□□□□ -2.14
IRX3P78415 NDUFA8P1-201ENST00000605525 367 ntBASIC1.68□□□□□ -2.14
IRX3P78415 MIR98-201ENST00000606724 119 ntBASIC1.68□□□□□ -2.14
IRX3P78415 MIR6504-201ENST00000613520 61 ntBASIC1.68□□□□□ -2.14
IRX3P78415 AC011155.2-201ENST00000623202 216 ntBASIC1.68□□□□□ -2.14
IRX3P78415 AC091931.1-201ENST00000623488 728 ntBASIC1.68□□□□□ -2.14
IRX3P78415 AL359740.1-201ENST00000624340 592 ntBASIC1.68□□□□□ -2.14
IRX3P78415 Z69720.2-201ENST00000624755 279 ntBASIC1.68□□□□□ -2.14
IRX3P78415 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.67□□□□□ -2.14
IRX3P78415 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.67□□□□□ -2.14
IRX3P78415 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
IRX3P78415 RNU1-62P-201ENST00000362599 164 ntBASIC1.67□□□□□ -2.14
IRX3P78415 RNU6-1222P-201ENST00000384615 107 ntBASIC1.67□□□□□ -2.14
IRX3P78415 MIR30A-201ENST00000385092 71 ntBASIC1.67□□□□□ -2.14
IRX3P78415 C1DP2-201ENST00000418167 426 ntBASIC1.67□□□□□ -2.14
IRX3P78415 AL590556.1-201ENST00000423231 483 ntBASIC1.67□□□□□ -2.14
IRX3P78415 AL445567.1-201ENST00000439121 144 ntBASIC1.67□□□□□ -2.14
IRX3P78415 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.67□□□□□ -2.14
IRX3P78415 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.67□□□□□ -2.14
IRX3P78415 AC023790.1-201ENST00000482174 347 ntBASIC1.67□□□□□ -2.14
IRX3P78415 MTCYBP35-201ENST00000503630 1137 ntBASIC1.67□□□□□ -2.14
IRX3P78415 MTND2P33-201ENST00000506452 1031 ntBASIC1.67□□□□□ -2.14
IRX3P78415 RNU1-86P-201ENST00000516108 154 ntBASIC1.67□□□□□ -2.14
IRX3P78415 RNU1-107P-201ENST00000516617 154 ntBASIC1.67□□□□□ -2.14
IRX3P78415 RNA5SP503-201ENST00000517047 117 ntBASIC1.67□□□□□ -2.14
IRX3P78415 DUXAP5-201ENST00000529668 529 ntBASIC1.67□□□□□ -2.14
IRX3P78415 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
IRX3P78415 AP002453.2-201ENST00000533503 320 ntBASIC1.67□□□□□ -2.14
IRX3P78415 AC022616.8-201ENST00000533569 253 ntBASIC1.67□□□□□ -2.14
IRX3P78415 AP000763.2-201ENST00000540641 163 ntBASIC1.67□□□□□ -2.14
IRX3P78415 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.67□□□□□ -2.14
IRX3P78415 AC093249.1-201ENST00000567049 203 ntBASIC1.67□□□□□ -2.14
IRX3P78415 U4.7-201ENST00000638126 106 ntBASIC1.67□□□□□ -2.14
IRX3P78415 RNU6-78P-201ENST00000362897 107 ntBASIC1.66□□□□□ -2.14
IRX3P78415 RNU6-550P-201ENST00000391057 101 ntBASIC1.66□□□□□ -2.14
IRX3P78415 SNORA26.8-201ENST00000391306 124 ntBASIC1.66□□□□□ -2.14
IRX3P78415 RNU2-3P-201ENST00000410144 191 ntBASIC1.66□□□□□ -2.14
IRX3P78415 RNU6-248P-201ENST00000410720 107 ntBASIC1.66□□□□□ -2.14
IRX3P78415 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.66□□□□□ -2.14
IRX3P78415 SRIP3-201ENST00000413200 219 ntBASIC1.66□□□□□ -2.14
IRX3P78415 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.66□□□□□ -2.14
IRX3P78415 AC133104.1-201ENST00000429100 218 ntBASIC1.66□□□□□ -2.14
IRX3P78415 AC245517.4-201ENST00000448601 281 ntBASIC1.66□□□□□ -2.14
IRX3P78415 RNU1-123P-201ENST00000458950 160 ntBASIC1.66□□□□□ -2.14
IRX3P78415 AC105417.1-201ENST00000514691 285 ntBASIC1.66□□□□□ -2.14
IRX3P78415 SNORA18.6-201ENST00000516792 115 ntBASIC1.66□□□□□ -2.14
IRX3P78415 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.66□□□□□ -2.14
IRX3P78415 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.66□□□□□ -2.14
IRX3P78415 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.66□□□□□ -2.14
IRX3P78415 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.66□□□□□ -2.14
IRX3P78415 MTCYBP33-201ENST00000575007 1130 ntBASIC1.66□□□□□ -2.14
IRX3P78415 AC091135.1-201ENST00000585943 307 ntBASIC1.66□□□□□ -2.14
IRX3P78415 AC064872.1-201ENST00000604823 1072 ntBASIC1.66□□□□□ -2.14
IRX3P78415 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
IRX3P78415 AC099842.1-201ENST00000619919 596 ntBASIC1.66□□□□□ -2.14
IRX3P78415 AC091895.1-201ENST00000624494 256 ntBASIC1.66□□□□□ -2.14
IRX3P78415 AC009161.2-201ENST00000624626 138 ntBASIC1.66□□□□□ -2.14
IRX3P78415 AP000648.3-201ENST00000623539 4507 ntBASIC1.66□□□□□ -2.14
IRX3P78415 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.65□□□□□ -2.15
IRX3P78415 RNU6-116P-201ENST00000384042 109 ntBASIC1.65□□□□□ -2.15
IRX3P78415 RNU6-434P-201ENST00000384376 107 ntBASIC1.65□□□□□ -2.15
IRX3P78415 MTND2P18-201ENST00000419962 1030 ntBASIC1.65□□□□□ -2.15
IRX3P78415 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.65□□□□□ -2.15
IRX3P78415 AC007969.2-201ENST00000441891 191 ntBASIC1.65□□□□□ -2.15
IRX3P78415 SNRPGP13-201ENST00000442212 177 ntBASIC1.65□□□□□ -2.15
IRX3P78415 AC244505.5-201ENST00000443639 207 ntBASIC1.65□□□□□ -2.15
IRX3P78415 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.65□□□□□ -2.15
IRX3P78415 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.65□□□□□ -2.15
IRX3P78415 MTCO3P9-201ENST00000506989 781 ntBASIC1.65□□□□□ -2.15
IRX3P78415 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.65□□□□□ -2.15
IRX3P78415 SNORA4.4-201ENST00000515921 135 ntBASIC1.65□□□□□ -2.15
IRX3P78415 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.65□□□□□ -2.15
IRX3P78415 MIR6078-201ENST00000611069 100 ntBASIC1.65□□□□□ -2.15
IRX3P78415 AP000770.2-201ENST00000623694 100 ntBASIC1.65□□□□□ -2.15
IRX3P78415 AC005609.4-201ENST00000625071 447 ntBASIC1.65□□□□□ -2.15
IRX3P78415 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
IRX3P78415 AP000560.1-201ENST00000624150 1937 ntBASIC1.64□□□□□ -2.15
IRX3P78415 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
IRX3P78415 RNU6-212P-201ENST00000362642 104 ntBASIC1.64□□□□□ -2.15
IRX3P78415 SNORD56.1-201ENST00000362913 68 ntBASIC1.64□□□□□ -2.15
IRX3P78415 RNU1-23P-201ENST00000363361 144 ntBASIC1.64□□□□□ -2.15
IRX3P78415 RNU6-527P-201ENST00000363425 104 ntBASIC1.64□□□□□ -2.15
IRX3P78415 Y_RNA.324-201ENST00000365165 102 ntBASIC1.64□□□□□ -2.15
IRX3P78415 RNA5SP465-201ENST00000391195 109 ntBASIC1.64□□□□□ -2.15
IRX3P78415 RNU2-29P-201ENST00000410423 189 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms