Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.13□□□□□ -2.39
RPS28P62857 Y_RNA.689-201ENST00000516589 107 ntBASIC0.13□□□□□ -2.39
RPS28P62857 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.13□□□□□ -2.39
RPS28P62857 AC091544.4-201ENST00000555268 342 ntBASIC0.13□□□□□ -2.39
RPS28P62857 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.13□□□□□ -2.39
RPS28P62857 MIR548AC-201ENST00000585049 88 ntBASIC0.13□□□□□ -2.39
RPS28P62857 AC009977.1-201ENST00000586015 570 ntBASIC0.13□□□□□ -2.39
RPS28P62857 AC174048.1-201ENST00000603389 144 ntBASIC0.13□□□□□ -2.39
RPS28P62857 AC016727.2-201ENST00000603988 621 ntBASIC0.13□□□□□ -2.39
RPS28P62857 AC006270.3-201ENST00000605967 1036 ntBASIC0.13□□□□□ -2.39
RPS28P62857 AC092106.3-201ENST00000611308 722 ntBASIC0.13□□□□□ -2.39
RPS28P62857 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.13□□□□□ -2.39
RPS28P62857 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.13□□□□□ -2.39
RPS28P62857 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
RPS28P62857 AC018630.2-201ENST00000534866 2403 ntBASIC0.12□□□□□ -2.39
RPS28P62857 snoZ40.1-201ENST00000364540 72 ntBASIC0.12□□□□□ -2.39
RPS28P62857 RNU6-1179P-201ENST00000384667 107 ntBASIC0.12□□□□□ -2.39
RPS28P62857 RNU1-119P-201ENST00000391122 165 ntBASIC0.12□□□□□ -2.39
RPS28P62857 RNU6-1245P-201ENST00000411130 106 ntBASIC0.12□□□□□ -2.39
RPS28P62857 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.12□□□□□ -2.39
RPS28P62857 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.12□□□□□ -2.39
RPS28P62857 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.12□□□□□ -2.39
RPS28P62857 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC0.12□□□□□ -2.39
RPS28P62857 MTCYBP39-201ENST00000437562 491 ntBASIC0.12□□□□□ -2.39
RPS28P62857 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.12□□□□□ -2.39
RPS28P62857 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.12□□□□□ -2.39
RPS28P62857 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.12□□□□□ -2.39
RPS28P62857 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC0.12□□□□□ -2.39
RPS28P62857 UBE2DNL-203ENST00000474922 222 ntBASIC0.12□□□□□ -2.39
RPS28P62857 AP000797.1-201ENST00000478870 387 ntBASIC0.12□□□□□ -2.39
RPS28P62857 RPS26P48-201ENST00000491713 339 ntBASIC0.12□□□□□ -2.39
RPS28P62857 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.12□□□□□ -2.39
RPS28P62857 RNA5SP384-201ENST00000516615 116 ntBASIC0.12□□□□□ -2.39
RPS28P62857 RNU6-1098P-201ENST00000516772 96 ntBASIC0.12□□□□□ -2.39
RPS28P62857 DEFB130C-202ENST00000530001 230 ntBASIC0.12□□□□□ -2.39
RPS28P62857 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.12□□□□□ -2.39
RPS28P62857 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.12□□□□□ -2.39
RPS28P62857 AL606834.3-201ENST00000602615 496 ntBASIC0.12□□□□□ -2.39
RPS28P62857 AC097065.2-201ENST00000608159 533 ntBASIC0.12□□□□□ -2.39
RPS28P62857 AC093913.1-201ENST00000614178 329 ntBASIC0.12□□□□□ -2.39
RPS28P62857 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.12□□□□□ -2.39
RPS28P62857 AC097372.5-201ENST00000623665 376 ntBASIC0.12□□□□□ -2.39
RPS28P62857 AC093875.1-201ENST00000623688 504 ntBASIC0.12□□□□□ -2.39
RPS28P62857 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.12□□□□□ -2.39
RPS28P62857 RNA5SP347-201ENST00000362445 119 ntBASIC0.11□□□□□ -2.39
RPS28P62857 RNU6-946P-201ENST00000383878 107 ntBASIC0.11□□□□□ -2.39
RPS28P62857 SNORA36.2-201ENST00000384004 127 ntBASIC0.11□□□□□ -2.39
RPS28P62857 SNORD116-13-201ENST00000384408 92 ntBASIC0.11□□□□□ -2.39
RPS28P62857 RNA5SP171-201ENST00000391071 115 ntBASIC0.11□□□□□ -2.39
RPS28P62857 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.11□□□□□ -2.39
RPS28P62857 CYCSP49-201ENST00000420810 319 ntBASIC0.11□□□□□ -2.39
RPS28P62857 MTCO1P27-201ENST00000448269 226 ntBASIC0.11□□□□□ -2.39
RPS28P62857 AL031313.1-201ENST00000448435 256 ntBASIC0.11□□□□□ -2.39
RPS28P62857 RNU7-95P-201ENST00000459222 64 ntBASIC0.11□□□□□ -2.39
RPS28P62857 SRRM1P2-201ENST00000464531 1192 ntBASIC0.11□□□□□ -2.39
RPS28P62857 OR8K2P-201ENST00000524645 927 ntBASIC0.11□□□□□ -2.39
RPS28P62857 AC027807.1-201ENST00000559921 996 ntBASIC0.11□□□□□ -2.39
RPS28P62857 AC025627.3-201ENST00000582078 182 ntBASIC0.11□□□□□ -2.39
RPS28P62857 MIR92B-201ENST00000607575 96 ntBASIC0.11□□□□□ -2.39
RPS28P62857 AL391813.2-201ENST00000609113 322 ntBASIC0.11□□□□□ -2.39
RPS28P62857 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.11□□□□□ -2.39
RPS28P62857 MIR6810-201ENST00000622701 70 ntBASIC0.11□□□□□ -2.39
RPS28P62857 AC090625.1-201ENST00000357130 210 ntBASIC0.1□□□□□ -2.39
RPS28P62857 MIRLET7D-201ENST00000362263 87 ntBASIC0.1□□□□□ -2.39
RPS28P62857 RNU6-1285P-201ENST00000363480 105 ntBASIC0.1□□□□□ -2.39
RPS28P62857 RNU5E-7P-201ENST00000365290 117 ntBASIC0.1□□□□□ -2.39
RPS28P62857 RPL21P1-201ENST00000399532 476 ntBASIC0.1□□□□□ -2.39
RPS28P62857 MTCYBP2-201ENST00000407745 171 ntBASIC0.1□□□□□ -2.39
RPS28P62857 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC0.1□□□□□ -2.39
RPS28P62857 AC016769.2-201ENST00000414815 475 ntBASIC0.1□□□□□ -2.39
RPS28P62857 C1DP2-201ENST00000418167 426 ntBASIC0.1□□□□□ -2.39
RPS28P62857 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.1□□□□□ -2.39
RPS28P62857 AC060773.1-201ENST00000421698 310 ntBASIC0.1□□□□□ -2.39
RPS28P62857 AC002486.1-201ENST00000435098 391 ntBASIC0.1□□□□□ -2.39
RPS28P62857 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.1□□□□□ -2.39
RPS28P62857 NFU1P2-201ENST00000448700 469 ntBASIC0.1□□□□□ -2.39
RPS28P62857 C1DP4-201ENST00000455429 424 ntBASIC0.1□□□□□ -2.39
RPS28P62857 AL049830.1-201ENST00000468034 425 ntBASIC0.1□□□□□ -2.39
RPS28P62857 SNRPGP7-201ENST00000469016 106 ntBASIC0.1□□□□□ -2.39
RPS28P62857 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.1□□□□□ -2.39
RPS28P62857 RNU6-229P-201ENST00000516614 102 ntBASIC0.1□□□□□ -2.39
RPS28P62857 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.1□□□□□ -2.39
RPS28P62857 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.1□□□□□ -2.39
RPS28P62857 ZNF321P-202ENST00000550843 495 ntBASIC0.1□□□□□ -2.39
RPS28P62857 AC090888.2-201ENST00000559765 1144 ntBASIC0.1□□□□□ -2.39
RPS28P62857 MIR3973-201ENST00000579824 107 ntBASIC0.1□□□□□ -2.39
RPS28P62857 MIR4742-201ENST00000581069 85 ntBASIC0.1□□□□□ -2.39
RPS28P62857 AC080078.2-201ENST00000603766 501 ntBASIC0.1□□□□□ -2.39
RPS28P62857 AL354696.1-201ENST00000614652 497 ntBASIC0.1□□□□□ -2.39
RPS28P62857 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC0.1□□□□□ -2.39
RPS28P62857 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC0.1□□□□□ -2.39
RPS28P62857 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
RPS28P62857 RNU6-1031P-201ENST00000384773 107 ntBASIC0.09□□□□□ -2.4
RPS28P62857 MIR483-201ENST00000385070 76 ntBASIC0.09□□□□□ -2.4
RPS28P62857 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
RPS28P62857 AC010587.2-201ENST00000511727 448 ntBASIC0.09□□□□□ -2.4
RPS28P62857 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.09□□□□□ -2.4
RPS28P62857 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.09□□□□□ -2.4
RPS28P62857 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.09□□□□□ -2.4
RPS28P62857 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms