Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AL163540.1-201ENST00000485382 386 ntBASIC0.26□□□□□ -2.37
LSM3P62310 AC011979.2-201ENST00000527568 352 ntBASIC0.26□□□□□ -2.37
LSM3P62310 AC015712.3-201ENST00000559380 164 ntBASIC0.26□□□□□ -2.37
LSM3P62310 CYP3A137P-201ENST00000562436 69 ntBASIC0.26□□□□□ -2.37
LSM3P62310 KC877982.1-201ENST00000602313 470 ntBASIC0.26□□□□□ -2.37
LSM3P62310 AC080078.2-201ENST00000603766 501 ntBASIC0.26□□□□□ -2.37
LSM3P62310 CTHRC1P1-201ENST00000605383 469 ntBASIC0.26□□□□□ -2.37
LSM3P62310 AP002802.2-201ENST00000605877 235 ntBASIC0.26□□□□□ -2.37
LSM3P62310 AC021506.2-201ENST00000612354 169 ntBASIC0.26□□□□□ -2.37
LSM3P62310 SCARNA4-202ENST00000625402 129 ntBASIC0.26□□□□□ -2.37
LSM3P62310 RNU6-392P-201ENST00000364926 101 ntBASIC0.25□□□□□ -2.37
LSM3P62310 FGF7P8-201ENST00000402994 292 ntBASIC0.25□□□□□ -2.37
LSM3P62310 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.25□□□□□ -2.37
LSM3P62310 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.25□□□□□ -2.37
LSM3P62310 AL121890.1-201ENST00000435457 205 ntBASIC0.25□□□□□ -2.37
LSM3P62310 AC092628.1-201ENST00000436250 252 ntBASIC0.25□□□□□ -2.37
LSM3P62310 AL117351.1-201ENST00000438864 766 ntBASIC0.25□□□□□ -2.37
LSM3P62310 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
LSM3P62310 RNU6-751P-201ENST00000516382 101 ntBASIC0.25□□□□□ -2.37
LSM3P62310 Y_RNA.689-201ENST00000516589 107 ntBASIC0.25□□□□□ -2.37
LSM3P62310 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.25□□□□□ -2.37
LSM3P62310 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.25□□□□□ -2.37
LSM3P62310 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.25□□□□□ -2.37
LSM3P62310 ZNF321P-202ENST00000550843 495 ntBASIC0.25□□□□□ -2.37
LSM3P62310 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.25□□□□□ -2.37
LSM3P62310 AC109446.1-201ENST00000566172 220 ntBASIC0.25□□□□□ -2.37
LSM3P62310 MIR4714-201ENST00000580728 77 ntBASIC0.25□□□□□ -2.37
LSM3P62310 AL929325.1-201ENST00000603096 117 ntBASIC0.25□□□□□ -2.37
LSM3P62310 AC012507.3-201ENST00000603556 477 ntBASIC0.25□□□□□ -2.37
LSM3P62310 AL138889.2-201ENST00000603883 242 ntBASIC0.25□□□□□ -2.37
LSM3P62310 AL031281.1-201ENST00000604049 488 ntBASIC0.25□□□□□ -2.37
LSM3P62310 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
LSM3P62310 MIR96-201ENST00000362288 78 ntBASIC0.24□□□□□ -2.37
LSM3P62310 AC092423.1-201ENST00000430165 186 ntBASIC0.24□□□□□ -2.37
LSM3P62310 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.24□□□□□ -2.37
LSM3P62310 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.24□□□□□ -2.37
LSM3P62310 Z73417.1-201ENST00000447373 778 ntBASIC0.24□□□□□ -2.37
LSM3P62310 AL031313.1-201ENST00000448435 256 ntBASIC0.24□□□□□ -2.37
LSM3P62310 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.24□□□□□ -2.37
LSM3P62310 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.24□□□□□ -2.37
LSM3P62310 SNORA68.3-201ENST00000515906 83 ntBASIC0.24□□□□□ -2.37
LSM3P62310 RNU6-334P-201ENST00000517072 102 ntBASIC0.24□□□□□ -2.37
LSM3P62310 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.24□□□□□ -2.37
LSM3P62310 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.24□□□□□ -2.37
LSM3P62310 AC008015.1-201ENST00000555505 465 ntBASIC0.24□□□□□ -2.37
LSM3P62310 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.24□□□□□ -2.37
LSM3P62310 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.24□□□□□ -2.37
LSM3P62310 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.24□□□□□ -2.37
LSM3P62310 AC106754.2-201ENST00000623006 233 ntBASIC0.24□□□□□ -2.37
LSM3P62310 RNU6-946P-201ENST00000383878 107 ntBASIC0.23□□□□□ -2.37
LSM3P62310 MIR1284-201ENST00000408337 120 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AC060773.1-201ENST00000421698 310 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.23□□□□□ -2.37
LSM3P62310 AC010154.1-201ENST00000425857 269 ntBASIC0.23□□□□□ -2.37
LSM3P62310 Z82205.1-201ENST00000428456 297 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AC073614.1-201ENST00000438690 650 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AC069257.2-201ENST00000441819 155 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AL358794.1-201ENST00000445689 381 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AL163973.1-201ENST00000484753 577 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AC091435.1-201ENST00000505442 584 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AC105758.1-201ENST00000506038 399 ntBASIC0.23□□□□□ -2.37
LSM3P62310 MTND3P5-201ENST00000512798 333 ntBASIC0.23□□□□□ -2.37
LSM3P62310 RNU6-1098P-201ENST00000516772 96 ntBASIC0.23□□□□□ -2.37
LSM3P62310 DEFB130C-202ENST00000530001 230 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.23□□□□□ -2.37
LSM3P62310 AC018659.1-201ENST00000551083 169 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AC090888.2-201ENST00000559765 1144 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.23□□□□□ -2.37
LSM3P62310 AC109446.2-201ENST00000567872 497 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AP000942.3-201ENST00000603702 160 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AC093913.1-201ENST00000614178 329 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AC136475.10-201ENST00000620253 385 ntBASIC0.23□□□□□ -2.37
LSM3P62310 AL138955.1-201ENST00000622881 1040 ntBASIC0.23□□□□□ -2.37
LSM3P62310 SNORD98-201ENST00000636377 67 ntBASIC0.23□□□□□ -2.37
LSM3P62310 RNU6-78P-201ENST00000362897 107 ntBASIC0.22□□□□□ -2.37
LSM3P62310 RNU6-1285P-201ENST00000363480 105 ntBASIC0.22□□□□□ -2.37
LSM3P62310 RNU6-348P-201ENST00000384386 107 ntBASIC0.22□□□□□ -2.37
LSM3P62310 RNU6-505P-201ENST00000384427 107 ntBASIC0.22□□□□□ -2.37
LSM3P62310 RNA5SP109-201ENST00000391010 116 ntBASIC0.22□□□□□ -2.37
LSM3P62310 MIR320C1-201ENST00000408566 88 ntBASIC0.22□□□□□ -2.37
LSM3P62310 MTCO1P21-201ENST00000416634 589 ntBASIC0.22□□□□□ -2.37
LSM3P62310 NDUFB1P2-201ENST00000449477 176 ntBASIC0.22□□□□□ -2.37
LSM3P62310 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.22□□□□□ -2.37
LSM3P62310 RNU7-14P-201ENST00000459331 62 ntBASIC0.22□□□□□ -2.37
LSM3P62310 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.22□□□□□ -2.37
LSM3P62310 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.22□□□□□ -2.37
LSM3P62310 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.22□□□□□ -2.37
LSM3P62310 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
LSM3P62310 SNORD3E-202ENST00000627253 216 ntBASIC0.22□□□□□ -2.37
LSM3P62310 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
LSM3P62310 RNA5SP347-201ENST00000362445 119 ntBASIC0.21□□□□□ -2.38
LSM3P62310 RNU6-534P-201ENST00000364877 106 ntBASIC0.21□□□□□ -2.38
LSM3P62310 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
LSM3P62310 RNU6-877P-201ENST00000383868 107 ntBASIC0.21□□□□□ -2.38
LSM3P62310 RNY1P8-201ENST00000383970 114 ntBASIC0.21□□□□□ -2.38
LSM3P62310 SNORA80D-201ENST00000384488 135 ntBASIC0.21□□□□□ -2.38
LSM3P62310 RNU6-1237P-201ENST00000384777 107 ntBASIC0.21□□□□□ -2.38
LSM3P62310 RNU1-119P-201ENST00000391122 165 ntBASIC0.21□□□□□ -2.38
LSM3P62310 SNORD99-201ENST00000408612 74 ntBASIC0.21□□□□□ -2.38
LSM3P62310 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms