Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC008571.1-201ENST00000467232 300 ntBASIC2.27□□□□□ -2.05
LMO4P61968 AC022447.4-201ENST00000504053 364 ntBASIC2.27□□□□□ -2.05
LMO4P61968 RNU6-475P-201ENST00000516073 104 ntBASIC2.27□□□□□ -2.05
LMO4P61968 MIR892C-201ENST00000516410 77 ntBASIC2.27□□□□□ -2.05
LMO4P61968 RNU6-635P-201ENST00000516651 102 ntBASIC2.27□□□□□ -2.05
LMO4P61968 RNU6-264P-201ENST00000517134 104 ntBASIC2.27□□□□□ -2.05
LMO4P61968 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.27□□□□□ -2.05
LMO4P61968 NACAP3-201ENST00000552100 481 ntBASIC2.27□□□□□ -2.05
LMO4P61968 AL161670.1-201ENST00000554348 137 ntBASIC2.27□□□□□ -2.05
LMO4P61968 SUB1P3-201ENST00000564581 315 ntBASIC2.27□□□□□ -2.05
LMO4P61968 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.27□□□□□ -2.05
LMO4P61968 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.27□□□□□ -2.05
LMO4P61968 AC010620.2-201ENST00000600135 313 ntBASIC2.27□□□□□ -2.05
LMO4P61968 AL121917.1-203ENST00000605534 577 ntBASIC2.27□□□□□ -2.05
LMO4P61968 PRR13P7-201ENST00000605538 430 ntBASIC2.27□□□□□ -2.05
LMO4P61968 AL606534.2-204ENST00000635008 178 ntBASIC2.27□□□□□ -2.05
LMO4P61968 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LMO4P61968 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.27□□□□□ -2.05
LMO4P61968 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
LMO4P61968 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.26□□□□□ -2.05
LMO4P61968 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LMO4P61968 AC138915.1-201ENST00000565427 1685 ntBASIC2.26□□□□□ -2.05
LMO4P61968 MIR26A1-201ENST00000362205 77 ntBASIC2.26□□□□□ -2.05
LMO4P61968 SNORD14B-201ENST00000364533 90 ntBASIC2.26□□□□□ -2.05
LMO4P61968 RNU6-702P-201ENST00000364982 107 ntBASIC2.26□□□□□ -2.05
LMO4P61968 RNU6-596P-201ENST00000365395 98 ntBASIC2.26□□□□□ -2.05
LMO4P61968 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LMO4P61968 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.26□□□□□ -2.05
LMO4P61968 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.26□□□□□ -2.05
LMO4P61968 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.26□□□□□ -2.05
LMO4P61968 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.26□□□□□ -2.05
LMO4P61968 AC009296.1-201ENST00000443146 155 ntBASIC2.26□□□□□ -2.05
LMO4P61968 CHEK2P4-201ENST00000450340 246 ntBASIC2.26□□□□□ -2.05
LMO4P61968 AC010655.3-201ENST00000478818 450 ntBASIC2.26□□□□□ -2.05
LMO4P61968 RPS29P20-201ENST00000489592 171 ntBASIC2.26□□□□□ -2.05
LMO4P61968 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.26□□□□□ -2.05
LMO4P61968 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.26□□□□□ -2.05
LMO4P61968 SEM1P1-201ENST00000506694 209 ntBASIC2.26□□□□□ -2.05
LMO4P61968 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.26□□□□□ -2.05
LMO4P61968 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.26□□□□□ -2.05
LMO4P61968 CBX3P8-201ENST00000532412 525 ntBASIC2.26□□□□□ -2.05
LMO4P61968 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.26□□□□□ -2.05
LMO4P61968 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.26□□□□□ -2.05
LMO4P61968 MIR3668-201ENST00000582138 75 ntBASIC2.26□□□□□ -2.05
LMO4P61968 MIR3976-201ENST00000606807 139 ntBASIC2.26□□□□□ -2.05
LMO4P61968 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LMO4P61968 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LMO4P61968 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.26□□□□□ -2.05
LMO4P61968 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
LMO4P61968 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
LMO4P61968 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.25□□□□□ -2.05
LMO4P61968 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.25□□□□□ -2.05
LMO4P61968 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LMO4P61968 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LMO4P61968 RNU4-82P-201ENST00000362443 140 ntBASIC2.25□□□□□ -2.05
LMO4P61968 Y_RNA.39-201ENST00000362620 98 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-37P-201ENST00000362692 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 Y_RNA.106-201ENST00000363189 100 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-238P-201ENST00000363313 106 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-11P-201ENST00000364234 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-99P-201ENST00000364721 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNA5SP126-201ENST00000365092 109 ntBASIC2.25□□□□□ -2.05
LMO4P61968 Y_RNA.314-201ENST00000365114 102 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-1318P-201ENST00000365389 103 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-25P-201ENST00000383873 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-1-201ENST00000383898 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU1-73P-201ENST00000383971 164 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-48P-201ENST00000384161 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-36P-201ENST00000384172 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-4P-201ENST00000384205 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-5P-201ENST00000384238 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-3P-201ENST00000384314 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-16P-201ENST00000384385 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-15P-201ENST00000384534 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-2-201ENST00000384627 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-29P-201ENST00000384637 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-9-201ENST00000384776 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-33P-201ENST00000384793 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU2-49P-201ENST00000410666 184 ntBASIC2.25□□□□□ -2.05
LMO4P61968 AL513477.1-202ENST00000417061 214 ntBASIC2.25□□□□□ -2.05
LMO4P61968 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.25□□□□□ -2.05
LMO4P61968 Z96811.1-201ENST00000445880 108 ntBASIC2.25□□□□□ -2.05
LMO4P61968 AL031274.1-201ENST00000450334 232 ntBASIC2.25□□□□□ -2.05
LMO4P61968 AC003982.1-202ENST00000469928 248 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RPL31P41-201ENST00000477967 372 ntBASIC2.25□□□□□ -2.05
LMO4P61968 AC090525.1-201ENST00000479116 478 ntBASIC2.25□□□□□ -2.05
LMO4P61968 FO393415.2-201ENST00000480085 343 ntBASIC2.25□□□□□ -2.05
LMO4P61968 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.25□□□□□ -2.05
LMO4P61968 RPL17P19-201ENST00000489069 552 ntBASIC2.25□□□□□ -2.05
LMO4P61968 MRPS35P2-201ENST00000508242 191 ntBASIC2.25□□□□□ -2.05
LMO4P61968 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.25□□□□□ -2.05
LMO4P61968 MRPS36P2-201ENST00000512569 299 ntBASIC2.25□□□□□ -2.05
LMO4P61968 AC096725.1-201ENST00000514266 313 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNA5SP380-201ENST00000517190 98 ntBASIC2.25□□□□□ -2.05
LMO4P61968 Y_RNA.721-201ENST00000517207 102 ntBASIC2.25□□□□□ -2.05
LMO4P61968 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LMO4P61968 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.25□□□□□ -2.05
LMO4P61968 CPDP1-201ENST00000579660 283 ntBASIC2.25□□□□□ -2.05
LMO4P61968 RNU6-6P-201ENST00000606623 107 ntBASIC2.25□□□□□ -2.05
LMO4P61968 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms