Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
VBP1P61758 HMGN1P14-201ENST00000412459 517 ntBASIC0.42□□□□□ -2.34
VBP1P61758 MTCO1P21-201ENST00000416634 589 ntBASIC0.42□□□□□ -2.34
VBP1P61758 AC011233.1-201ENST00000422812 283 ntBASIC0.42□□□□□ -2.34
VBP1P61758 RPL23AP30-201ENST00000432419 501 ntBASIC0.42□□□□□ -2.34
VBP1P61758 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.42□□□□□ -2.34
VBP1P61758 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.42□□□□□ -2.34
VBP1P61758 snoU13.23-201ENST00000458863 104 ntBASIC0.42□□□□□ -2.34
VBP1P61758 TOMM22P6-201ENST00000465035 409 ntBASIC0.42□□□□□ -2.34
VBP1P61758 AC048334.1-201ENST00000477975 159 ntBASIC0.42□□□□□ -2.34
VBP1P61758 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.42□□□□□ -2.34
VBP1P61758 MTND3P5-201ENST00000512798 333 ntBASIC0.42□□□□□ -2.34
VBP1P61758 AC018659.1-201ENST00000551083 169 ntBASIC0.42□□□□□ -2.34
VBP1P61758 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.42□□□□□ -2.34
VBP1P61758 AC109446.1-201ENST00000566172 220 ntBASIC0.42□□□□□ -2.34
VBP1P61758 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.42□□□□□ -2.34
VBP1P61758 MIR544B-201ENST00000582372 78 ntBASIC0.42□□□□□ -2.34
VBP1P61758 AC110760.3-201ENST00000598794 467 ntBASIC0.42□□□□□ -2.34
VBP1P61758 AL596327.1-201ENST00000603629 213 ntBASIC0.42□□□□□ -2.34
VBP1P61758 AL353765.1-201ENST00000605514 183 ntBASIC0.42□□□□□ -2.34
VBP1P61758 RNU6-1285P-201ENST00000363480 105 ntBASIC0.41□□□□□ -2.34
VBP1P61758 RNU4-12P-201ENST00000365233 139 ntBASIC0.41□□□□□ -2.34
VBP1P61758 SNORA32.2-201ENST00000384049 122 ntBASIC0.41□□□□□ -2.34
VBP1P61758 RNU6-769P-201ENST00000384407 104 ntBASIC0.41□□□□□ -2.34
VBP1P61758 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.41□□□□□ -2.34
VBP1P61758 AL031779.1-201ENST00000415663 330 ntBASIC0.41□□□□□ -2.34
VBP1P61758 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.41□□□□□ -2.34
VBP1P61758 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.41□□□□□ -2.34
VBP1P61758 AC104806.1-201ENST00000508720 308 ntBASIC0.41□□□□□ -2.34
VBP1P61758 SNORD79.1-201ENST00000516069 84 ntBASIC0.41□□□□□ -2.34
VBP1P61758 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.41□□□□□ -2.34
VBP1P61758 AC133485.1-201ENST00000567176 124 ntBASIC0.41□□□□□ -2.34
VBP1P61758 AC138907.6-201ENST00000568401 126 ntBASIC0.41□□□□□ -2.34
VBP1P61758 AL353778.1-201ENST00000603149 408 ntBASIC0.41□□□□□ -2.34
VBP1P61758 AC174048.1-201ENST00000603389 144 ntBASIC0.41□□□□□ -2.34
VBP1P61758 AL034555.1-201ENST00000604816 211 ntBASIC0.41□□□□□ -2.34
VBP1P61758 AL158032.1-201ENST00000605401 106 ntBASIC0.41□□□□□ -2.34
VBP1P61758 AP001596.2-201ENST00000608410 312 ntBASIC0.41□□□□□ -2.34
VBP1P61758 AL512506.1-201ENST00000613918 449 ntBASIC0.41□□□□□ -2.34
VBP1P61758 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.41□□□□□ -2.34
VBP1P61758 AC126177.8-201ENST00000618339 1015 ntBASIC0.41□□□□□ -2.34
VBP1P61758 U6.42-201ENST00000618440 107 ntBASIC0.41□□□□□ -2.34
VBP1P61758 AL512427.1-201ENST00000618593 349 ntBASIC0.41□□□□□ -2.34
VBP1P61758 RNU6-560P-201ENST00000364007 108 ntBASIC0.4□□□□□ -2.35
VBP1P61758 RPL17P50-201ENST00000396131 546 ntBASIC0.4□□□□□ -2.35
VBP1P61758 RNA5SP111-201ENST00000411386 101 ntBASIC0.4□□□□□ -2.35
VBP1P61758 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.4□□□□□ -2.35
VBP1P61758 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.4□□□□□ -2.35
VBP1P61758 AL358794.1-201ENST00000445689 381 ntBASIC0.4□□□□□ -2.35
VBP1P61758 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.4□□□□□ -2.35
VBP1P61758 AC010531.2-201ENST00000465012 153 ntBASIC0.4□□□□□ -2.35
VBP1P61758 AC005840.1-201ENST00000498412 377 ntBASIC0.4□□□□□ -2.35
VBP1P61758 AC108078.2-201ENST00000510750 236 ntBASIC0.4□□□□□ -2.35
VBP1P61758 RNU1-86P-201ENST00000516108 154 ntBASIC0.4□□□□□ -2.35
VBP1P61758 RNU1-107P-201ENST00000516617 154 ntBASIC0.4□□□□□ -2.35
VBP1P61758 RN7SKP219-201ENST00000516825 296 ntBASIC0.4□□□□□ -2.35
VBP1P61758 AP002453.2-201ENST00000533503 320 ntBASIC0.4□□□□□ -2.35
VBP1P61758 AC092451.2-201ENST00000538746 658 ntBASIC0.4□□□□□ -2.35
VBP1P61758 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.4□□□□□ -2.35
VBP1P61758 AC008507.2-201ENST00000588402 1176 ntBASIC0.4□□□□□ -2.35
VBP1P61758 AC024060.1-201ENST00000607052 494 ntBASIC0.4□□□□□ -2.35
VBP1P61758 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.4□□□□□ -2.35
VBP1P61758 AC136475.10-201ENST00000620253 385 ntBASIC0.4□□□□□ -2.35
VBP1P61758 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
VBP1P61758 RNU6-462P-201ENST00000362659 105 ntBASIC0.39□□□□□ -2.35
VBP1P61758 RNU6-78P-201ENST00000362897 107 ntBASIC0.39□□□□□ -2.35
VBP1P61758 RNU6-969P-201ENST00000383900 105 ntBASIC0.39□□□□□ -2.35
VBP1P61758 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.39□□□□□ -2.35
VBP1P61758 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.39□□□□□ -2.35
VBP1P61758 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.39□□□□□ -2.35
VBP1P61758 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.39□□□□□ -2.35
VBP1P61758 AC098869.1-201ENST00000481627 292 ntBASIC0.39□□□□□ -2.35
VBP1P61758 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.39□□□□□ -2.35
VBP1P61758 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.39□□□□□ -2.35
VBP1P61758 AC079395.1-201ENST00000510981 262 ntBASIC0.39□□□□□ -2.35
VBP1P61758 RNU6-1098P-201ENST00000516772 96 ntBASIC0.39□□□□□ -2.35
VBP1P61758 ZNF321P-202ENST00000550843 495 ntBASIC0.39□□□□□ -2.35
VBP1P61758 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.39□□□□□ -2.35
VBP1P61758 MIR3136-201ENST00000583498 78 ntBASIC0.39□□□□□ -2.35
VBP1P61758 AC012507.3-201ENST00000603556 477 ntBASIC0.39□□□□□ -2.35
VBP1P61758 CTHRC1P1-201ENST00000605383 469 ntBASIC0.39□□□□□ -2.35
VBP1P61758 AC008147.4-201ENST00000617570 1204 ntBASIC0.39□□□□□ -2.35
VBP1P61758 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
VBP1P61758 RNU6-960P-201ENST00000364056 120 ntBASIC0.38□□□□□ -2.35
VBP1P61758 RNU6-1054P-201ENST00000411293 104 ntBASIC0.38□□□□□ -2.35
VBP1P61758 AC060773.1-201ENST00000421698 310 ntBASIC0.38□□□□□ -2.35
VBP1P61758 MTND4P20-201ENST00000424125 869 ntBASIC0.38□□□□□ -2.35
VBP1P61758 CALM2P2-201ENST00000428512 440 ntBASIC0.38□□□□□ -2.35
VBP1P61758 RNU7-14P-201ENST00000459331 62 ntBASIC0.38□□□□□ -2.35
VBP1P61758 RNU7-34P-201ENST00000459394 64 ntBASIC0.38□□□□□ -2.35
VBP1P61758 RPS26P48-201ENST00000491713 339 ntBASIC0.38□□□□□ -2.35
VBP1P61758 RNA5SP384-201ENST00000516615 116 ntBASIC0.38□□□□□ -2.35
VBP1P61758 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.38□□□□□ -2.35
VBP1P61758 AC087894.1-201ENST00000538359 518 ntBASIC0.38□□□□□ -2.35
VBP1P61758 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.38□□□□□ -2.35
VBP1P61758 AC087883.1-201ENST00000551882 391 ntBASIC0.38□□□□□ -2.35
VBP1P61758 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.38□□□□□ -2.35
VBP1P61758 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.38□□□□□ -2.35
VBP1P61758 TPRKBP2-201ENST00000565969 475 ntBASIC0.38□□□□□ -2.35
VBP1P61758 MIR548AC-201ENST00000585049 88 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms