Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.46□□□□□ -2.02
CLDN20P56880 MIR4319-201ENST00000577285 85 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.46□□□□□ -2.02
CLDN20P56880 AC060766.3-201ENST00000591442 263 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 AC009541.1-201ENST00000438279 2662 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
CLDN20P56880 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
CLDN20P56880 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.45□□□□□ -2.02
CLDN20P56880 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.45□□□□□ -2.02
CLDN20P56880 OR56A5-201ENST00000340110 738 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 MIR26A1-201ENST00000362205 77 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 RNU6-212P-201ENST00000362642 104 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 Y_RNA.111-201ENST00000363248 100 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 RNU6-1285P-201ENST00000363480 105 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 Y_RNA.594-201ENST00000410373 140 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 RNU6-1050P-201ENST00000410388 107 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 RN7SKP61-201ENST00000410642 295 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 RNA5SP21-201ENST00000410917 96 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 RNU6-370P-201ENST00000411008 104 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 RNA5SP492-201ENST00000411330 114 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 AL513477.1-202ENST00000417061 214 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 AC078809.1-201ENST00000427601 140 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 Z82205.1-201ENST00000428456 297 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 AC112220.1-201ENST00000434628 355 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.45□□□□□ -2.02
CLDN20P56880 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.45□□□□□ -2.02
CLDN20P56880 SNORD109B-201ENST00000458961 67 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 SNORD109A-201ENST00000459128 67 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 Y_RNA.675-201ENST00000516389 149 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 SNORA31.15-201ENST00000516771 132 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 SCARNA3-201ENST00000517097 143 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 AC093027.1-201ENST00000546698 429 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.45□□□□□ -2.02
CLDN20P56880 AC109446.1-201ENST00000566172 220 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 FRG2DP-202ENST00000566967 323 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 AC103810.1-201ENST00000579873 453 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 MIR4795-201ENST00000584182 89 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 AP000654.2-201ENST00000605633 586 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 RPL23AP88-201ENST00000605759 454 ntBASIC2.45□□□□□ -2.02
CLDN20P56880 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLDN20P56880 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLDN20P56880 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLDN20P56880 KPNA2P1-201ENST00000458289 1591 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 AP000560.1-201ENST00000624150 1937 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLDN20P56880 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDN20P56880 ZNF271P-202ENST00000465539 1970 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 Y_RNA.61-201ENST00000362835 102 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 Y_RNA.123-201ENST00000363338 102 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 RNU6-529P-201ENST00000363383 104 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 RNU6-1059P-201ENST00000363752 98 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN20P56880 RNU6-784P-201ENST00000384330 106 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 Y_RNA.510-201ENST00000384511 114 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 MIR186-201ENST00000384988 86 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 RNU6-174P-201ENST00000410406 106 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 RNU2-52P-201ENST00000410680 190 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 EIF1AXP1-201ENST00000419267 435 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 EIF4EP2-201ENST00000422816 654 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 BX276092.3-201ENST00000424182 230 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN20P56880 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN20P56880 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN20P56880 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.44□□□□□ -2.02
CLDN20P56880 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDN20P56880 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDN20P56880 RPS15AP7-201ENST00000439294 405 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDN20P56880 AC108938.1-201ENST00000451204 136 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 Y_RNA.632-201ENST00000459189 102 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 SNRPGP7-201ENST00000469016 106 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 SNORA25.11-201ENST00000515935 105 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 Y_RNA.670-201ENST00000516255 105 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN20P56880 COX6CP5-201ENST00000527162 228 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 HSPE1P4-201ENST00000550617 308 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN20P56880 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDN20P56880 AC011494.1-201ENST00000596454 237 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 PISRT1.1-201ENST00000616930 107 ntBASIC2.44□□□□□ -2.02
CLDN20P56880 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.44□□□□□ -2.02
CLDN20P56880 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDN20P56880 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLDN20P56880 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.44□□□□□ -2.02
CLDN20P56880 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN20P56880 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.43□□□□□ -2.02
CLDN20P56880 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CLDN20P56880 AC092268.1-201ENST00000342691 405 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 RNU4-79P-201ENST00000362764 141 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 Y_RNA.67-201ENST00000362870 100 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 RNU6-1188P-201ENST00000363795 107 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 RNU6-1180P-201ENST00000364935 107 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 RNU6-842P-201ENST00000384269 107 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 Y_RNA.509-201ENST00000384506 99 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 MIR9-1-201ENST00000385198 89 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 AL591034.2-201ENST00000402839 359 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 U6atac.2-201ENST00000408644 118 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 RNA5SP181-201ENST00000410246 98 ntBASIC2.43□□□□□ -2.02
CLDN20P56880 EIF4EP4-201ENST00000424916 578 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms