Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.44□□□□□ -1.86
GFRA1P56159 RPS3P1-201ENST00000456781 192 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 U8.18-201ENST00000459285 133 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 RNU6-625P-201ENST00000459412 107 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 AC103975.1-201ENST00000482506 483 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.44□□□□□ -1.86
GFRA1P56159 AC026726.1-201ENST00000512859 601 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 SNORA70.14-201ENST00000516205 110 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 EIF4A1P12-201ENST00000551910 141 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 AC233702.2-202ENST00000562547 291 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 MIR5187-201ENST00000583479 76 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 KLKP1-201ENST00000595979 403 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 MZT1P2-201ENST00000604387 248 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 AL121772.2-201ENST00000614331 297 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 AL357075.2-201ENST00000614906 189 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 U2.14-201ENST00000615943 113 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 AC039056.2-201ENST00000622261 511 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.44□□□□□ -1.86
GFRA1P56159 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.44□□□□□ -1.86
GFRA1P56159 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
GFRA1P56159 AC026241.1-201ENST00000517873 2142 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
GFRA1P56159 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.43□□□□□ -1.86
GFRA1P56159 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
GFRA1P56159 AL359854.1-201ENST00000614203 1594 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.43□□□□□ -1.86
GFRA1P56159 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
GFRA1P56159 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.43□□□□□ -1.86
GFRA1P56159 RNU1-62P-201ENST00000362599 164 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 U3.9-201ENST00000363823 204 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 SNORA72.2-201ENST00000365028 127 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 RNU6-1175P-201ENST00000365200 107 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 Y_RNA.539-201ENST00000384635 107 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
GFRA1P56159 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 RNA5SP306-201ENST00000411087 107 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.43□□□□□ -1.86
GFRA1P56159 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
GFRA1P56159 IFNA11P-201ENST00000446352 526 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 SNORA84-201ENST00000459229 133 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 RPL23AP70-201ENST00000483361 460 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 AC145146.1-201ENST00000496370 254 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.43□□□□□ -1.86
GFRA1P56159 RNU4-71P-201ENST00000516258 113 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 AC022695.1-201ENST00000522089 237 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.43□□□□□ -1.86
GFRA1P56159 RRN3P3-201ENST00000549207 578 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 AC090877.1-201ENST00000561418 344 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 MIR1254-2-201ENST00000579553 63 ntBASIC3.43□□□□□ -1.86
GFRA1P56159 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.43□□□□□ -1.86
GFRA1P56159 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
GFRA1P56159 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
GFRA1P56159 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
GFRA1P56159 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
GFRA1P56159 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
GFRA1P56159 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
GFRA1P56159 RNU4-15P-201ENST00000362613 141 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 RNA5SP124-201ENST00000362739 110 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 Y_RNA.65-201ENST00000362846 100 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 RNU6-200P-201ENST00000364743 107 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 Y_RNA.277-201ENST00000364754 102 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 RNU6-326P-201ENST00000365480 107 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 Y_RNA.498-201ENST00000384460 102 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 Y_RNA.569-201ENST00000384749 103 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 MIR1183-201ENST00000408856 89 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 RPL23AP36-201ENST00000413895 458 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 AL139247.1-201ENST00000422768 325 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 Z98742.2-201ENST00000431564 187 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.42□□□□□ -1.86
GFRA1P56159 AL358232.1-201ENST00000448030 501 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 AL133547.1-201ENST00000448546 220 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 AC091179.3-201ENST00000474761 144 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 RAC1P2-201ENST00000511164 579 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 SNORA67.7-201ENST00000516664 135 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 RNU2-31P-201ENST00000516954 155 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 AC018448.1-201ENST00000552843 316 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 MIR3158-1-201ENST00000583596 81 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 AC020914.4-201ENST00000597690 277 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 AL670379.2-201ENST00000604983 252 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 AC006001.4-201ENST00000622243 395 ntBASIC3.42□□□□□ -1.86
GFRA1P56159 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.42□□□□□ -1.86
GFRA1P56159 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
GFRA1P56159 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
GFRA1P56159 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
GFRA1P56159 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
GFRA1P56159 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
GFRA1P56159 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
GFRA1P56159 GABRG2-229ENST00000641017 3628 ntBASIC3.41□□□□□ -1.86
GFRA1P56159 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
GFRA1P56159 RNA5SP139-201ENST00000364340 117 ntBASIC3.41□□□□□ -1.86
GFRA1P56159 Y_RNA.286-201ENST00000364813 102 ntBASIC3.41□□□□□ -1.86
GFRA1P56159 RNU6-514P-201ENST00000384208 107 ntBASIC3.41□□□□□ -1.86
GFRA1P56159 MIR591-201ENST00000385290 95 ntBASIC3.41□□□□□ -1.86
GFRA1P56159 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
GFRA1P56159 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.41□□□□□ -1.86
GFRA1P56159 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.41□□□□□ -1.86
GFRA1P56159 AC097463.2-201ENST00000421074 142 ntBASIC3.41□□□□□ -1.86
GFRA1P56159 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.41□□□□□ -1.86
GFRA1P56159 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.41□□□□□ -1.86
GFRA1P56159 RPL21P129-201ENST00000491732 478 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms