Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU6-19P-201ENST00000384718 107 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 MIR144-201ENST00000384886 86 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 MIR1294-201ENST00000408503 142 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGCS2P54868 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGCS2P54868 PTGES3P4-201ENST00000426243 356 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGCS2P54868 RNU6-1208P-201ENST00000459588 107 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 RPL7P43-201ENST00000478876 753 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGCS2P54868 Y_RNA.654-201ENST00000497848 106 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.12□□□□□ -2.07
HMGCS2P54868 SNORA14.1-201ENST00000516113 141 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 RNU6-189P-201ENST00000516120 101 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 Y_RNA.673-201ENST00000516306 88 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 SNORA43.2-201ENST00000516652 128 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGCS2P54868 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 BNIP3P25-201ENST00000596023 559 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 AC092747.3-201ENST00000603769 301 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 AL121917.1-203ENST00000605534 577 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 snoU13.31-201ENST00000607291 104 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 AC069294.1-201ENST00000608397 350 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 U2.17-201ENST00000611454 95 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 AC245884.12-201ENST00000615364 59 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 AC002553.4-201ENST00000616896 331 ntBASIC2.12□□□□□ -2.07
HMGCS2P54868 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMGCS2P54868 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGCS2P54868 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGCS2P54868 RNU6-661P-201ENST00000362409 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-37P-201ENST00000362692 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-11P-201ENST00000364234 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-25P-201ENST00000383873 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-1-201ENST00000383898 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-48P-201ENST00000384161 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-36P-201ENST00000384172 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-4P-201ENST00000384205 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-5P-201ENST00000384238 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 U8.10-201ENST00000384260 133 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-3P-201ENST00000384314 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-16P-201ENST00000384385 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-15P-201ENST00000384534 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-2-201ENST00000384627 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-29P-201ENST00000384637 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-9-201ENST00000384776 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-33P-201ENST00000384793 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 MIR218-1-201ENST00000384999 110 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-332P-201ENST00000391193 108 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 FGF7P8-201ENST00000402994 292 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGCS2P54868 CYCSP48-201ENST00000417124 323 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.11□□□□□ -2.07
HMGCS2P54868 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGCS2P54868 EIF4EP4-201ENST00000424916 578 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 MTCYBP18-201ENST00000501056 747 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HMGCS2P54868 MTCYBP40-201ENST00000509390 1135 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-1069P-201ENST00000516612 133 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 RNA5SP82-201ENST00000516707 92 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 AP005902.1-201ENST00000521358 186 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 AP004607.1-201ENST00000524456 203 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 AC023050.3-201ENST00000541142 333 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 CR383656.8-201ENST00000549046 145 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 MIR4765-201ENST00000585007 77 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HMGCS2P54868 RNU6-6P-201ENST00000606623 107 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 uc_338.14-201ENST00000613162 166 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 AC026585.1-201ENST00000619582 524 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 SCARNA4-202ENST00000625402 129 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGCS2P54868 AC121333.1-201ENST00000567488 2709 ntBASIC2.11□□□□□ -2.07
HMGCS2P54868 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HMGCS2P54868 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGCS2P54868 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
HMGCS2P54868 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGCS2P54868 RNU6-78P-201ENST00000362897 107 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 Y_RNA.248-201ENST00000364501 109 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 RNU6-877P-201ENST00000383868 107 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 RNU6-748P-201ENST00000384648 107 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 Y_RNA.573-201ENST00000384763 105 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 RAP1BP3-201ENST00000407180 549 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 RNU6-1148P-201ENST00000410992 104 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 RNA5SP270-201ENST00000411361 118 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGCS2P54868 SNORD56-201ENST00000413522 71 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 BTF3P4-201ENST00000418852 495 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 MRPS10P2-201ENST00000431226 381 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGCS2P54868 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGCS2P54868 AC080013.2-201ENST00000460866 323 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 AP001324.2-201ENST00000461163 319 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 AP001025.1-201ENST00000486139 332 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 AC083904.1-201ENST00000487828 231 ntBASIC2.1□□□□□ -2.07
HMGCS2P54868 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.1□□□□□ -2.07
HMGCS2P54868 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGCS2P54868 AC107393.1-201ENST00000512403 346 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms