Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 UBA52P6-201ENST00000399822 382 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 RNU6-121P-201ENST00000410525 99 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 MTCO3P19-201ENST00000415864 321 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 RPL21P38-201ENST00000418090 167 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.2□□□□□ -1.9
CACNA2D1P54289 TOMM20P4-201ENST00000427861 435 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 MTCO3P29-201ENST00000432119 779 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 HMGN2P20-201ENST00000437531 273 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 UQCRHP3-201ENST00000451503 251 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 SUMO1P2-201ENST00000452524 304 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 MTND4LP30-201ENST00000454092 297 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 RPS29P26-201ENST00000477483 171 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 AC098869.1-201ENST00000481627 292 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.2□□□□□ -1.9
CACNA2D1P54289 AP003733.2-201ENST00000529409 171 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 AC022080.3-201ENST00000544433 482 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 AC007375.1-201ENST00000554513 578 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.2□□□□□ -1.9
CACNA2D1P54289 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.2□□□□□ -1.9
CACNA2D1P54289 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.2□□□□□ -1.9
CACNA2D1P54289 AC009318.2-201ENST00000610917 651 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CACNA2D1P54289 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
CACNA2D1P54289 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.2□□□□□ -1.9
CACNA2D1P54289 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.2□□□□□ -1.9
CACNA2D1P54289 AL136164.4-201ENST00000625013 2135 ntBASIC3.2□□□□□ -1.9
CACNA2D1P54289 SNORA71.1-201ENST00000364523 117 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 SNORA20.1-201ENST00000364790 130 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 SNORA46-201ENST00000384762 135 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CACNA2D1P54289 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 RNU2-33P-201ENST00000410344 192 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 TMEM167AP1-201ENST00000423409 219 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.19□□□□□ -1.9
CACNA2D1P54289 RPEP5-201ENST00000441137 268 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.19□□□□□ -1.9
CACNA2D1P54289 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CACNA2D1P54289 AC079354.2-201ENST00000453523 154 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 RPL39P38-201ENST00000467018 153 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 HMGB1P35-201ENST00000503360 598 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 HMGB3P17-201ENST00000504195 649 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 RNU6-1023P-201ENST00000516137 106 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 RNU6-572P-201ENST00000516724 80 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 AC034114.1-201ENST00000520293 285 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 ATP5F1P5-201ENST00000526403 760 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.19□□□□□ -1.9
CACNA2D1P54289 EIF4BP1-201ENST00000554881 351 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 AC073410.2-201ENST00000603240 332 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 AC141273.2-201ENST00000618989 130 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 CUL1P1-201ENST00000509510 2425 ntBASIC3.19□□□□□ -1.9
CACNA2D1P54289 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.19□□□□□ -1.9
CACNA2D1P54289 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CACNA2D1P54289 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CACNA2D1P54289 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CACNA2D1P54289 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CACNA2D1P54289 AL355596.1-201ENST00000565399 3996 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 Y_RNA.562-201ENST00000384695 113 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 RNU6-1093P-201ENST00000391194 107 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 MIR548I3-201ENST00000408378 149 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 MIR548I1-201ENST00000408810 149 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 AL356867.1-201ENST00000429623 299 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.18□□□□□ -1.9
CACNA2D1P54289 SUMO1P3-201ENST00000439961 304 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.18□□□□□ -1.9
CACNA2D1P54289 AC092798.1-201ENST00000458542 409 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 RPS29P27-201ENST00000463711 170 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 TRBVB-201ENST00000477100 408 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.18□□□□□ -1.9
CACNA2D1P54289 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA2D1P54289 RNU6-911P-201ENST00000516523 104 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 AL590705.4-201ENST00000532209 134 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA2D1P54289 MIR4474-201ENST00000579189 78 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 AC012433.1-201ENST00000588916 398 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 AL137843.1-201ENST00000605078 385 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.18□□□□□ -1.9
CACNA2D1P54289 SDR42E1P4-201ENST00000620894 481 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 U6.104-201ENST00000637979 90 ntBASIC3.18□□□□□ -1.9
CACNA2D1P54289 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CACNA2D1P54289 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.18□□□□□ -1.9
CACNA2D1P54289 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.18□□□□□ -1.9
CACNA2D1P54289 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CACNA2D1P54289 Z75746.1-201ENST00000440243 2080 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 Y_RNA.123-201ENST00000363338 102 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 Y_RNA.358-201ENST00000365491 99 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 RNU6-611P-201ENST00000384276 104 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 AL603908.1-201ENST00000406098 201 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.17□□□□□ -1.9
CACNA2D1P54289 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.17□□□□□ -1.9
CACNA2D1P54289 MTND2P29-201ENST00000438595 412 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 AC013470.1-201ENST00000453438 462 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 RPL30P10-201ENST00000488148 337 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 RNU6-377P-201ENST00000515965 102 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 AC007536.1-201ENST00000533382 349 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.17□□□□□ -1.9
CACNA2D1P54289 AL645944.1-201ENST00000603857 493 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 AL365434.2-201ENST00000607979 234 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 AC005046.1-201ENST00000608515 625 ntBASIC3.17□□□□□ -1.9
CACNA2D1P54289 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms