Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RNU6-842P-201ENST00000384269 107 ntBASIC2.83□□□□□ -1.96
PMS2P54278 RNU6-692P-201ENST00000384496 107 ntBASIC2.83□□□□□ -1.96
PMS2P54278 SNORA41-201ENST00000384675 132 ntBASIC2.83□□□□□ -1.96
PMS2P54278 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PMS2P54278 RPS29P13-201ENST00000402041 169 ntBASIC2.83□□□□□ -1.96
PMS2P54278 RNU6-325P-201ENST00000411132 105 ntBASIC2.83□□□□□ -1.96
PMS2P54278 AL133396.1-201ENST00000432048 687 ntBASIC2.83□□□□□ -1.96
PMS2P54278 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.83□□□□□ -1.96
PMS2P54278 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.83□□□□□ -1.96
PMS2P54278 RPS29P26-201ENST00000477483 171 ntBASIC2.83□□□□□ -1.96
PMS2P54278 AC090525.1-201ENST00000479116 478 ntBASIC2.83□□□□□ -1.96
PMS2P54278 AC090096.1-201ENST00000489168 390 ntBASIC2.83□□□□□ -1.96
PMS2P54278 PTP4A1P4-201ENST00000512479 322 ntBASIC2.83□□□□□ -1.96
PMS2P54278 RNU6-976P-201ENST00000516086 111 ntBASIC2.83□□□□□ -1.96
PMS2P54278 Y_RNA.687-201ENST00000516558 91 ntBASIC2.83□□□□□ -1.96
PMS2P54278 RNU6-1213P-201ENST00000517075 94 ntBASIC2.83□□□□□ -1.96
PMS2P54278 SNRPGP18-201ENST00000553000 214 ntBASIC2.83□□□□□ -1.96
PMS2P54278 AC005899.2-201ENST00000584353 90 ntBASIC2.83□□□□□ -1.96
PMS2P54278 VN1R107P-201ENST00000601784 209 ntBASIC2.83□□□□□ -1.96
PMS2P54278 AC009314.1-201ENST00000603871 304 ntBASIC2.83□□□□□ -1.96
PMS2P54278 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PMS2P54278 AC116312.1-201ENST00000606841 314 ntBASIC2.83□□□□□ -1.96
PMS2P54278 MTND4P27-201ENST00000450813 1354 ntBASIC2.83□□□□□ -1.96
PMS2P54278 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PMS2P54278 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PMS2P54278 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PMS2P54278 AC096644.4-201ENST00000563417 2912 ntBASIC2.82□□□□□ -1.96
PMS2P54278 Z82195.2-201ENST00000612348 18351 ntBASIC2.82□□□□□ -1.96
PMS2P54278 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PMS2P54278 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.82□□□□□ -1.96
PMS2P54278 RNU6-942P-201ENST00000363002 107 ntBASIC2.82□□□□□ -1.96
PMS2P54278 SNORA68.1-201ENST00000364537 132 ntBASIC2.82□□□□□ -1.96
PMS2P54278 RNU6-1040P-201ENST00000383974 107 ntBASIC2.82□□□□□ -1.96
PMS2P54278 RNU6-1083P-201ENST00000384022 107 ntBASIC2.82□□□□□ -1.96
PMS2P54278 RNU6-306P-201ENST00000384617 107 ntBASIC2.82□□□□□ -1.96
PMS2P54278 MIR147B-201ENST00000390185 80 ntBASIC2.82□□□□□ -1.96
PMS2P54278 RNU6-1106P-201ENST00000390845 107 ntBASIC2.82□□□□□ -1.96
PMS2P54278 RNU2-25P-201ENST00000411041 191 ntBASIC2.82□□□□□ -1.96
PMS2P54278 AC018865.2-201ENST00000423631 129 ntBASIC2.82□□□□□ -1.96
PMS2P54278 USMG5P1-201ENST00000425964 177 ntBASIC2.82□□□□□ -1.96
PMS2P54278 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.82□□□□□ -1.96
PMS2P54278 AC105272.1-201ENST00000438604 198 ntBASIC2.82□□□□□ -1.96
PMS2P54278 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.82□□□□□ -1.96
PMS2P54278 AL135938.1-201ENST00000443141 297 ntBASIC2.82□□□□□ -1.96
PMS2P54278 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PMS2P54278 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.82□□□□□ -1.96
PMS2P54278 RPL7P42-201ENST00000481005 679 ntBASIC2.82□□□□□ -1.96
PMS2P54278 RNU5F-8P-201ENST00000515941 111 ntBASIC2.82□□□□□ -1.96
PMS2P54278 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.82□□□□□ -1.96
PMS2P54278 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.82□□□□□ -1.96
PMS2P54278 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.82□□□□□ -1.96
PMS2P54278 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.82□□□□□ -1.96
PMS2P54278 AL356575.1-201ENST00000603008 283 ntBASIC2.82□□□□□ -1.96
PMS2P54278 AC024153.1-201ENST00000603103 365 ntBASIC2.82□□□□□ -1.96
PMS2P54278 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.82□□□□□ -1.96
PMS2P54278 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.82□□□□□ -1.96
PMS2P54278 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.82□□□□□ -1.96
PMS2P54278 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.82□□□□□ -1.96
PMS2P54278 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.82□□□□□ -1.96
PMS2P54278 MAPK10-266ENST00000641066 6555 ntBASIC2.81□□□□□ -1.96
PMS2P54278 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.81□□□□□ -1.96
PMS2P54278 Y_RNA.5-201ENST00000362334 102 ntBASIC2.81□□□□□ -1.96
PMS2P54278 RNU6-1115P-201ENST00000362490 106 ntBASIC2.81□□□□□ -1.96
PMS2P54278 Y_RNA.202-201ENST00000364083 110 ntBASIC2.81□□□□□ -1.96
PMS2P54278 RNA5SP126-201ENST00000365092 109 ntBASIC2.81□□□□□ -1.96
PMS2P54278 RNU1-100P-201ENST00000365255 165 ntBASIC2.81□□□□□ -1.96
PMS2P54278 U8.8-201ENST00000365399 135 ntBASIC2.81□□□□□ -1.96
PMS2P54278 RNU6-827P-201ENST00000365553 106 ntBASIC2.81□□□□□ -1.96
PMS2P54278 Y_RNA.422-201ENST00000384054 114 ntBASIC2.81□□□□□ -1.96
PMS2P54278 RNU1-138P-201ENST00000384093 164 ntBASIC2.81□□□□□ -1.96
PMS2P54278 RNU6-890P-201ENST00000384121 107 ntBASIC2.81□□□□□ -1.96
PMS2P54278 RNU6-748P-201ENST00000384648 107 ntBASIC2.81□□□□□ -1.96
PMS2P54278 PMCHL1-202ENST00000423102 261 ntBASIC2.81□□□□□ -1.96
PMS2P54278 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.81□□□□□ -1.96
PMS2P54278 RPS15AP10-201ENST00000432472 382 ntBASIC2.81□□□□□ -1.96
PMS2P54278 HIGD1AP2-201ENST00000446367 280 ntBASIC2.81□□□□□ -1.96
PMS2P54278 AC006026.2-201ENST00000457376 180 ntBASIC2.81□□□□□ -1.96
PMS2P54278 AC107626.1-201ENST00000471084 183 ntBASIC2.81□□□□□ -1.96
PMS2P54278 AL163540.1-201ENST00000485382 386 ntBASIC2.81□□□□□ -1.96
PMS2P54278 SMURF2P1-201ENST00000514992 481 ntBASIC2.81□□□□□ -1.96
PMS2P54278 SCGB1D5P-201ENST00000515134 247 ntBASIC2.81□□□□□ -1.96
PMS2P54278 ACA59.2-201ENST00000517061 156 ntBASIC2.81□□□□□ -1.96
PMS2P54278 AP004607.1-201ENST00000524456 203 ntBASIC2.81□□□□□ -1.96
PMS2P54278 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.81□□□□□ -1.96
PMS2P54278 MIR4446-201ENST00000578505 67 ntBASIC2.81□□□□□ -1.96
PMS2P54278 MIR3124-201ENST00000582636 67 ntBASIC2.81□□□□□ -1.96
PMS2P54278 AL049779.4-201ENST00000604500 156 ntBASIC2.81□□□□□ -1.96
PMS2P54278 AC018889.1-201ENST00000605372 397 ntBASIC2.81□□□□□ -1.96
PMS2P54278 PART1_1.1-201ENST00000611761 217 ntBASIC2.81□□□□□ -1.96
PMS2P54278 uc_338.14-201ENST00000613162 166 ntBASIC2.81□□□□□ -1.96
PMS2P54278 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.81□□□□□ -1.96
PMS2P54278 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.8□□□□□ -1.96
PMS2P54278 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PMS2P54278 MTND5P30-201ENST00000452896 1731 ntBASIC2.8□□□□□ -1.96
PMS2P54278 Y_RNA.132-201ENST00000363421 102 ntBASIC2.8□□□□□ -1.96
PMS2P54278 RNA5SP393-201ENST00000363423 117 ntBASIC2.8□□□□□ -1.96
PMS2P54278 SNORA25.6-201ENST00000364121 118 ntBASIC2.8□□□□□ -1.96
PMS2P54278 Y_RNA.252-201ENST00000364556 101 ntBASIC2.8□□□□□ -1.96
PMS2P54278 Y_RNA.445-201ENST00000384168 102 ntBASIC2.8□□□□□ -1.96
PMS2P54278 RNU6-851P-201ENST00000384565 107 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms