Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.74□□□□□ -2.13
MSH6P52701 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.74□□□□□ -2.13
MSH6P52701 GPR143P-201ENST00000434155 205 ntBASIC1.74□□□□□ -2.13
MSH6P52701 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.74□□□□□ -2.13
MSH6P52701 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.74□□□□□ -2.13
MSH6P52701 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.74□□□□□ -2.13
MSH6P52701 MTND3P25-201ENST00000509243 135 ntBASIC1.74□□□□□ -2.13
MSH6P52701 RNA5SP137-201ENST00000516833 135 ntBASIC1.74□□□□□ -2.13
MSH6P52701 RNU6-410P-201ENST00000517006 107 ntBASIC1.74□□□□□ -2.13
MSH6P52701 MIR3126-201ENST00000577443 74 ntBASIC1.74□□□□□ -2.13
MSH6P52701 RN7SL793P-201ENST00000583259 296 ntBASIC1.74□□□□□ -2.13
MSH6P52701 AC073539.2-201ENST00000597113 165 ntBASIC1.74□□□□□ -2.13
MSH6P52701 RNU1-23P-201ENST00000363361 144 ntBASIC1.73□□□□□ -2.13
MSH6P52701 RNU4-41P-201ENST00000364426 143 ntBASIC1.73□□□□□ -2.13
MSH6P52701 Y_RNA.367-201ENST00000365544 101 ntBASIC1.73□□□□□ -2.13
MSH6P52701 RNU6-1105P-201ENST00000384774 107 ntBASIC1.73□□□□□ -2.13
MSH6P52701 RNU2-23P-201ENST00000410545 195 ntBASIC1.73□□□□□ -2.13
MSH6P52701 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.73□□□□□ -2.13
MSH6P52701 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.73□□□□□ -2.13
MSH6P52701 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.73□□□□□ -2.13
MSH6P52701 AC006026.2-201ENST00000457376 180 ntBASIC1.73□□□□□ -2.13
MSH6P52701 PMCHL2-203ENST00000457791 237 ntBASIC1.73□□□□□ -2.13
MSH6P52701 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.73□□□□□ -2.13
MSH6P52701 MTND3P7-201ENST00000474435 343 ntBASIC1.73□□□□□ -2.13
MSH6P52701 MTCO3P9-201ENST00000506989 781 ntBASIC1.73□□□□□ -2.13
MSH6P52701 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.73□□□□□ -2.13
MSH6P52701 MTCYBP40-201ENST00000509390 1135 ntBASIC1.73□□□□□ -2.13
MSH6P52701 AC104136.1-201ENST00000512969 394 ntBASIC1.73□□□□□ -2.13
MSH6P52701 OR5AL2P-201ENST00000532185 920 ntBASIC1.73□□□□□ -2.13
MSH6P52701 IMMP1LP2-201ENST00000552954 492 ntBASIC1.73□□□□□ -2.13
MSH6P52701 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.73□□□□□ -2.13
MSH6P52701 AC064872.1-201ENST00000604823 1072 ntBASIC1.73□□□□□ -2.13
MSH6P52701 AC022202.1-201ENST00000613515 211 ntBASIC1.73□□□□□ -2.13
MSH6P52701 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.73□□□□□ -2.13
MSH6P52701 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.73□□□□□ -2.13
MSH6P52701 AC008555.8-201ENST00000623602 2168 ntBASIC1.73□□□□□ -2.13
MSH6P52701 Y_RNA.169-201ENST00000363745 96 ntBASIC1.72□□□□□ -2.13
MSH6P52701 RNU6-116P-201ENST00000384042 109 ntBASIC1.72□□□□□ -2.13
MSH6P52701 MIR454-201ENST00000390180 115 ntBASIC1.72□□□□□ -2.13
MSH6P52701 RNU2-32P-201ENST00000411193 191 ntBASIC1.72□□□□□ -2.13
MSH6P52701 BTF3L4P1-201ENST00000413813 468 ntBASIC1.72□□□□□ -2.13
MSH6P52701 CYCSP33-201ENST00000414485 327 ntBASIC1.72□□□□□ -2.13
MSH6P52701 RPL31P35-201ENST00000431058 377 ntBASIC1.72□□□□□ -2.13
MSH6P52701 snoU13.14-201ENST00000459372 104 ntBASIC1.72□□□□□ -2.13
MSH6P52701 SNORD27.1-201ENST00000516319 72 ntBASIC1.72□□□□□ -2.13
MSH6P52701 RNU6-113P-201ENST00000516653 101 ntBASIC1.72□□□□□ -2.13
MSH6P52701 RNU6-586P-201ENST00000517265 104 ntBASIC1.72□□□□□ -2.13
MSH6P52701 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.72□□□□□ -2.13
MSH6P52701 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.72□□□□□ -2.13
MSH6P52701 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.72□□□□□ -2.13
MSH6P52701 MIR4287-201ENST00000579398 78 ntBASIC1.72□□□□□ -2.13
MSH6P52701 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.72□□□□□ -2.13
MSH6P52701 NIFKP6-201ENST00000598115 845 ntBASIC1.72□□□□□ -2.13
MSH6P52701 AC245014.2-201ENST00000603689 287 ntBASIC1.72□□□□□ -2.13
MSH6P52701 Z94722.1-201ENST00000604328 474 ntBASIC1.72□□□□□ -2.13
MSH6P52701 AC246785.4-201ENST00000605374 287 ntBASIC1.72□□□□□ -2.13
MSH6P52701 MIR98-201ENST00000606724 119 ntBASIC1.72□□□□□ -2.13
MSH6P52701 AC026585.1-201ENST00000619582 524 ntBASIC1.72□□□□□ -2.13
MSH6P52701 U6.114-201ENST00000636407 96 ntBASIC1.72□□□□□ -2.13
MSH6P52701 U3.4-201ENST00000363352 213 ntBASIC1.72□□□□□ -2.13
MSH6P52701 SNORA18.2-201ENST00000383865 132 ntBASIC1.72□□□□□ -2.13
MSH6P52701 MIR1-2-201ENST00000384961 85 ntBASIC1.72□□□□□ -2.13
MSH6P52701 RNU6-550P-201ENST00000391057 101 ntBASIC1.72□□□□□ -2.13
MSH6P52701 CBX3P9-201ENST00000402326 552 ntBASIC1.72□□□□□ -2.13
MSH6P52701 AL512604.1-201ENST00000404812 257 ntBASIC1.72□□□□□ -2.13
MSH6P52701 RNU2-48P-201ENST00000410694 191 ntBASIC1.72□□□□□ -2.13
MSH6P52701 BX295541.1-201ENST00000417774 250 ntBASIC1.72□□□□□ -2.13
MSH6P52701 AC092447.3-201ENST00000426027 686 ntBASIC1.72□□□□□ -2.13
MSH6P52701 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.72□□□□□ -2.13
MSH6P52701 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.72□□□□□ -2.13
MSH6P52701 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.72□□□□□ -2.13
MSH6P52701 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.72□□□□□ -2.13
MSH6P52701 SNORA4.4-201ENST00000515921 135 ntBASIC1.72□□□□□ -2.13
MSH6P52701 SNORA18.6-201ENST00000516792 115 ntBASIC1.72□□□□□ -2.13
MSH6P52701 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.72□□□□□ -2.13
MSH6P52701 AC034114.1-201ENST00000520293 285 ntBASIC1.72□□□□□ -2.13
MSH6P52701 AC107953.1-201ENST00000522216 297 ntBASIC1.72□□□□□ -2.13
MSH6P52701 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.72□□□□□ -2.13
MSH6P52701 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.72□□□□□ -2.13
MSH6P52701 AC093249.1-201ENST00000567049 203 ntBASIC1.72□□□□□ -2.13
MSH6P52701 MIR4529-201ENST00000578110 78 ntBASIC1.72□□□□□ -2.13
MSH6P52701 CLIC4P2-201ENST00000601934 717 ntBASIC1.72□□□□□ -2.13
MSH6P52701 ELOCP5-201ENST00000604924 333 ntBASIC1.72□□□□□ -2.13
MSH6P52701 AL159153.1-201ENST00000619688 317 ntBASIC1.72□□□□□ -2.13
MSH6P52701 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
MSH6P52701 RNU6-1287P-201ENST00000362914 107 ntBASIC1.71□□□□□ -2.14
MSH6P52701 SNORA62.1-201ENST00000364287 154 ntBASIC1.71□□□□□ -2.14
MSH6P52701 RNU6-45P-201ENST00000384471 107 ntBASIC1.71□□□□□ -2.14
MSH6P52701 RNU6-1060P-201ENST00000384664 107 ntBASIC1.71□□□□□ -2.14
MSH6P52701 HMGN2P39-201ENST00000398005 273 ntBASIC1.71□□□□□ -2.14
MSH6P52701 RN7SKP51-201ENST00000410781 304 ntBASIC1.71□□□□□ -2.14
MSH6P52701 OR9R1P-201ENST00000412200 877 ntBASIC1.71□□□□□ -2.14
MSH6P52701 PIGFP2-201ENST00000421400 651 ntBASIC1.71□□□□□ -2.14
MSH6P52701 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.71□□□□□ -2.14
MSH6P52701 AL031667.1-201ENST00000440222 725 ntBASIC1.71□□□□□ -2.14
MSH6P52701 MTND2P4-201ENST00000445034 1004 ntBASIC1.71□□□□□ -2.14
MSH6P52701 RNU7-182P-201ENST00000459009 62 ntBASIC1.71□□□□□ -2.14
MSH6P52701 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.71□□□□□ -2.14
MSH6P52701 ARL2BPP4-201ENST00000506854 471 ntBASIC1.71□□□□□ -2.14
MSH6P52701 AC074344.1-201ENST00000512823 224 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms