Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MIR6516-201ENST00000630554 81 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
GTF2A1P52655 Y_RNA.363-201ENST00000365529 113 ntBASIC0.3□□□□□ -2.36
GTF2A1P52655 SNORA32.2-201ENST00000384049 122 ntBASIC0.3□□□□□ -2.36
GTF2A1P52655 RNU6-278P-201ENST00000390945 109 ntBASIC0.3□□□□□ -2.36
GTF2A1P52655 AC007969.2-201ENST00000441891 191 ntBASIC0.3□□□□□ -2.36
GTF2A1P52655 MTCO1P27-201ENST00000448269 226 ntBASIC0.3□□□□□ -2.36
GTF2A1P52655 TPRKBP1-201ENST00000456243 481 ntBASIC0.3□□□□□ -2.36
GTF2A1P52655 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
GTF2A1P52655 AP003355.1-201ENST00000518956 587 ntBASIC0.3□□□□□ -2.36
GTF2A1P52655 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.3□□□□□ -2.36
GTF2A1P52655 DEFB130C-202ENST00000530001 230 ntBASIC0.3□□□□□ -2.36
GTF2A1P52655 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.3□□□□□ -2.36
GTF2A1P52655 AL132657.2-201ENST00000564417 358 ntBASIC0.3□□□□□ -2.36
GTF2A1P52655 SNORA59B-202ENST00000578183 701 ntBASIC0.3□□□□□ -2.36
GTF2A1P52655 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.3□□□□□ -2.36
GTF2A1P52655 AC136443.5-201ENST00000603741 370 ntBASIC0.3□□□□□ -2.36
GTF2A1P52655 AC078880.5-201ENST00000617845 421 ntBASIC0.3□□□□□ -2.36
GTF2A1P52655 ELL2P3-201ENST00000457883 1602 ntBASIC0.3□□□□□ -2.36
GTF2A1P52655 U3.8-201ENST00000363675 217 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 snoZ40.1-201ENST00000364540 72 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 AF228730.1-201ENST00000397972 663 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 AC011233.1-201ENST00000422812 283 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 MTND4P20-201ENST00000424125 869 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 MTCO3P18-201ENST00000440206 761 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.29□□□□□ -2.36
GTF2A1P52655 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.29□□□□□ -2.36
GTF2A1P52655 AC093899.1-201ENST00000457984 376 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 RPS29P1-201ENST00000465274 159 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.29□□□□□ -2.36
GTF2A1P52655 AC098869.1-201ENST00000481627 292 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 MTCO3P7-201ENST00000510008 774 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 AP001893.2-201ENST00000526949 202 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.29□□□□□ -2.36
GTF2A1P52655 MIR4742-201ENST00000581069 85 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 AC126177.8-201ENST00000618339 1015 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 AC009509.4-201ENST00000619202 509 ntBASIC0.29□□□□□ -2.36
GTF2A1P52655 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
GTF2A1P52655 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
GTF2A1P52655 SNORD114-22-201ENST00000365423 72 ntBASIC0.28□□□□□ -2.36
GTF2A1P52655 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
GTF2A1P52655 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.28□□□□□ -2.36
GTF2A1P52655 ISCA1P6-201ENST00000427740 390 ntBASIC0.28□□□□□ -2.36
GTF2A1P52655 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.28□□□□□ -2.36
GTF2A1P52655 AC245047.7-201ENST00000440265 293 ntBASIC0.28□□□□□ -2.36
GTF2A1P52655 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.28□□□□□ -2.36
GTF2A1P52655 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.28□□□□□ -2.36
GTF2A1P52655 AC112206.3-201ENST00000514578 389 ntBASIC0.28□□□□□ -2.36
GTF2A1P52655 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
GTF2A1P52655 OR8K2P-201ENST00000524645 927 ntBASIC0.28□□□□□ -2.36
GTF2A1P52655 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.28□□□□□ -2.36
GTF2A1P52655 MIR5093-201ENST00000583199 100 ntBASIC0.28□□□□□ -2.36
GTF2A1P52655 AL353778.1-201ENST00000603149 408 ntBASIC0.28□□□□□ -2.36
GTF2A1P52655 AL034555.1-201ENST00000604816 211 ntBASIC0.28□□□□□ -2.36
GTF2A1P52655 AC006270.3-201ENST00000605967 1036 ntBASIC0.28□□□□□ -2.36
GTF2A1P52655 AL138955.1-201ENST00000622881 1040 ntBASIC0.28□□□□□ -2.36
GTF2A1P52655 AC024940.5-201ENST00000622889 474 ntBASIC0.28□□□□□ -2.36
GTF2A1P52655 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.27□□□□□ -2.37
GTF2A1P52655 RNU6-534P-201ENST00000364877 106 ntBASIC0.27□□□□□ -2.37
GTF2A1P52655 RNU6-438P-201ENST00000365561 103 ntBASIC0.27□□□□□ -2.37
GTF2A1P52655 RPS3AP36-201ENST00000398190 775 ntBASIC0.27□□□□□ -2.37
GTF2A1P52655 AL603865.2-201ENST00000401679 213 ntBASIC0.27□□□□□ -2.37
GTF2A1P52655 RPL23AP95-201ENST00000426806 265 ntBASIC0.27□□□□□ -2.37
GTF2A1P52655 AC092423.1-201ENST00000430165 186 ntBASIC0.27□□□□□ -2.37
GTF2A1P52655 AL035398.1-201ENST00000430869 322 ntBASIC0.27□□□□□ -2.37
GTF2A1P52655 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.27□□□□□ -2.37
GTF2A1P52655 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.27□□□□□ -2.37
GTF2A1P52655 AC006026.2-201ENST00000457376 180 ntBASIC0.27□□□□□ -2.37
GTF2A1P52655 RNU7-34P-201ENST00000459394 64 ntBASIC0.27□□□□□ -2.37
GTF2A1P52655 MTCO3P9-201ENST00000506989 781 ntBASIC0.27□□□□□ -2.37
GTF2A1P52655 FABP5P5-201ENST00000515537 406 ntBASIC0.27□□□□□ -2.37
GTF2A1P52655 SUMO2P16-201ENST00000519475 264 ntBASIC0.27□□□□□ -2.37
GTF2A1P52655 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.27□□□□□ -2.37
GTF2A1P52655 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.27□□□□□ -2.37
GTF2A1P52655 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.27□□□□□ -2.37
GTF2A1P52655 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
GTF2A1P52655 MIR1284-201ENST00000408337 120 ntBASIC0.26□□□□□ -2.37
GTF2A1P52655 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.26□□□□□ -2.37
GTF2A1P52655 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.26□□□□□ -2.37
GTF2A1P52655 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.26□□□□□ -2.37
GTF2A1P52655 AC010531.2-201ENST00000465012 153 ntBASIC0.26□□□□□ -2.37
GTF2A1P52655 RPS26P48-201ENST00000491713 339 ntBASIC0.26□□□□□ -2.37
GTF2A1P52655 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.26□□□□□ -2.37
GTF2A1P52655 RNU6-237P-201ENST00000515985 71 ntBASIC0.26□□□□□ -2.37
GTF2A1P52655 MIR5695-201ENST00000579717 85 ntBASIC0.26□□□□□ -2.37
GTF2A1P52655 MIR3136-201ENST00000583498 78 ntBASIC0.26□□□□□ -2.37
GTF2A1P52655 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
GTF2A1P52655 AC099785.1-201ENST00000605697 437 ntBASIC0.26□□□□□ -2.37
GTF2A1P52655 AC104073.3-201ENST00000610942 955 ntBASIC0.26□□□□□ -2.37
GTF2A1P52655 AC021506.2-201ENST00000612354 169 ntBASIC0.26□□□□□ -2.37
GTF2A1P52655 AC131159.1-201ENST00000621854 213 ntBASIC0.26□□□□□ -2.37
GTF2A1P52655 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
GTF2A1P52655 MTND4P14-201ENST00000435799 1354 ntBASIC0.25□□□□□ -2.37
GTF2A1P52655 RNU6-1285P-201ENST00000363480 105 ntBASIC0.25□□□□□ -2.37
GTF2A1P52655 RNU6-384P-201ENST00000364900 104 ntBASIC0.25□□□□□ -2.37
GTF2A1P52655 RNU6-609P-201ENST00000365459 107 ntBASIC0.25□□□□□ -2.37
GTF2A1P52655 RNU6-190P-201ENST00000384154 102 ntBASIC0.25□□□□□ -2.37
GTF2A1P52655 RNU6-1235P-201ENST00000384559 107 ntBASIC0.25□□□□□ -2.37
GTF2A1P52655 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms