Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL645568.3-201ENST00000433683 316 ntBASIC2.7□□□□□ -1.98
CLCN3P51790 AC236972.2-201ENST00000434979 310 ntBASIC2.7□□□□□ -1.98
CLCN3P51790 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.7□□□□□ -1.98
CLCN3P51790 AC012308.1-201ENST00000451232 178 ntBASIC2.7□□□□□ -1.98
CLCN3P51790 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.7□□□□□ -1.98
CLCN3P51790 AC130509.1-201ENST00000464158 433 ntBASIC2.7□□□□□ -1.98
CLCN3P51790 RNU6-377P-201ENST00000515965 102 ntBASIC2.7□□□□□ -1.98
CLCN3P51790 RNA5SP24-201ENST00000516478 95 ntBASIC2.7□□□□□ -1.98
CLCN3P51790 RNU6-1332P-201ENST00000516666 104 ntBASIC2.7□□□□□ -1.98
CLCN3P51790 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.7□□□□□ -1.98
CLCN3P51790 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.7□□□□□ -1.98
CLCN3P51790 CBX3P7-201ENST00000532876 502 ntBASIC2.7□□□□□ -1.98
CLCN3P51790 AC022432.1-201ENST00000595739 310 ntBASIC2.7□□□□□ -1.98
CLCN3P51790 AC019159.1-201ENST00000605094 187 ntBASIC2.7□□□□□ -1.98
CLCN3P51790 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CLCN3P51790 AC069528.2-201ENST00000624849 1991 ntBASIC2.7□□□□□ -1.98
CLCN3P51790 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLCN3P51790 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.7□□□□□ -1.98
CLCN3P51790 Y_RNA.395-201ENST00000383945 109 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 RNU6-622P-201ENST00000384272 103 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 RPS29P13-201ENST00000402041 169 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 MIR1302-11-201ENST00000408051 138 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 SNORA3.2-201ENST00000408221 125 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 MIR1302-9-201ENST00000408365 138 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 MIR1302-10-201ENST00000408734 138 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.69□□□□□ -1.98
CLCN3P51790 UBE2V1P4-201ENST00000425374 344 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.69□□□□□ -1.98
CLCN3P51790 AC104389.3-201ENST00000445629 235 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.69□□□□□ -1.98
CLCN3P51790 ELOCP24-201ENST00000456370 334 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.69□□□□□ -1.98
CLCN3P51790 AC018437.1-201ENST00000492214 406 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 RPL22P13-201ENST00000493291 347 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 RPS27P27-201ENST00000498779 255 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 ANXA2P1-201ENST00000505539 926 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 AC116337.1-201ENST00000509680 687 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 SNORA31.6-201ENST00000516241 130 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.69□□□□□ -1.98
CLCN3P51790 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.69□□□□□ -1.98
CLCN3P51790 AC020661.2-201ENST00000560114 134 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 AC093249.1-201ENST00000567049 203 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 MIR5092-201ENST00000583139 88 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 MIR3616-201ENST00000584070 92 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 ELOCP5-201ENST00000604924 333 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 AL121917.1-203ENST00000605534 577 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 MIR1302-2-201ENST00000607096 138 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 AC046143.2-201ENST00000609789 160 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 AC126177.8-201ENST00000618339 1015 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 AC244517.12-201ENST00000623581 663 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 AC064859.1-201ENST00000624741 174 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 MIR7157-201ENST00000635801 60 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 MTND4LP32-201ENST00000636111 270 ntBASIC2.69□□□□□ -1.98
CLCN3P51790 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLCN3P51790 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLCN3P51790 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.69□□□□□ -1.98
CLCN3P51790 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.68□□□□□ -1.98
CLCN3P51790 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLCN3P51790 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLCN3P51790 RNU6-105P-201ENST00000363909 104 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 Y_RNA.326-201ENST00000365176 113 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLCN3P51790 RNU6-1106P-201ENST00000390845 107 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 RNU4-53P-201ENST00000410828 140 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 RNU6-370P-201ENST00000411008 104 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.68□□□□□ -1.98
CLCN3P51790 AC005534.2-201ENST00000431047 433 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.68□□□□□ -1.98
CLCN3P51790 AP001324.2-201ENST00000461163 319 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 AC026782.1-201ENST00000512952 449 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 SNORA31.23-201ENST00000517219 133 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 AC109329.1-201ENST00000518744 317 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.68□□□□□ -1.98
CLCN3P51790 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.68□□□□□ -1.98
CLCN3P51790 AC021269.2-201ENST00000532318 330 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 AC010186.2-204ENST00000537668 439 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.68□□□□□ -1.98
CLCN3P51790 AC025423.5-201ENST00000550230 219 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.68□□□□□ -1.98
CLCN3P51790 BNIP3P16-201ENST00000589779 534 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 AC103810.6-201ENST00000606708 136 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 AC090617.7-201ENST00000623952 126 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 MIR7515-201ENST00000637837 67 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.68□□□□□ -1.98
CLCN3P51790 RBBP8P1-201ENST00000449447 1844 ntBASIC2.68□□□□□ -1.98
CLCN3P51790 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLCN3P51790 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLCN3P51790 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLCN3P51790 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLCN3P51790 RNU6-1010P-201ENST00000362757 107 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 RNU6-214P-201ENST00000384130 107 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 Y_RNA.579-201ENST00000390939 94 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLCN3P51790 AL513477.1-202ENST00000417061 214 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 AL591043.1-201ENST00000432461 424 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCN3P51790 AC009296.1-201ENST00000443146 155 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 AC124916.1-201ENST00000444020 547 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 RPS27AP9-201ENST00000477681 438 ntBASIC2.67□□□□□ -1.98
CLCN3P51790 AP001025.1-201ENST00000486139 332 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms