Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RPL31P61-201ENST00000496160 376 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 RNA5SP446-201ENST00000515955 82 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF144AP50876 MIR4270-201ENST00000581799 70 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF144AP50876 MIR7703-201ENST00000620784 77 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF144AP50876 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
RNF144AP50876 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF144AP50876 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF144AP50876 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.21□□□□□ -1.74
RNF144AP50876 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
RNF144AP50876 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF144AP50876 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF144AP50876 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF144AP50876 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF144AP50876 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF144AP50876 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF144AP50876 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF144AP50876 Y_RNA.120-201ENST00000363304 110 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 Y_RNA.280-201ENST00000364765 112 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 RNA5SP151-201ENST00000365632 117 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 RNU6-1080P-201ENST00000383982 107 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 U8.12-201ENST00000384701 133 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 MIR518C-201ENST00000384822 101 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 RNY4P30-201ENST00000410216 95 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 AL353748.1-201ENST00000440753 474 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 ZFRP1-201ENST00000457579 2970 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 AC010469.1-201ENST00000463864 576 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 RPS26P28-201ENST00000470806 348 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 AC084357.1-201ENST00000473404 255 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 IGKV1-32-201ENST00000519290 311 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 AP001781.1-201ENST00000530977 207 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF144AP50876 AL591926.4-201ENST00000616895 298 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 MIR7154-201ENST00000620673 73 ntBASIC4.2□□□□□ -1.74
RNF144AP50876 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF144AP50876 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF144AP50876 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF144AP50876 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
RNF144AP50876 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF144AP50876 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF144AP50876 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF144AP50876 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
RNF144AP50876 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF144AP50876 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RNF144AP50876 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RNF144AP50876 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.19□□□□□ -1.74
RNF144AP50876 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF144AP50876 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF144AP50876 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RNF144AP50876 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF144AP50876 MIR450A1-201ENST00000362262 91 ntBASIC4.19□□□□□ -1.74
RNF144AP50876 RNU6-50P-201ENST00000362356 103 ntBASIC4.19□□□□□ -1.74
RNF144AP50876 RNU6-600P-201ENST00000362524 99 ntBASIC4.19□□□□□ -1.74
RNF144AP50876 SNORA71.2-201ENST00000364941 134 ntBASIC4.19□□□□□ -1.74
RNF144AP50876 AP002088.1-201ENST00000382740 395 ntBASIC4.19□□□□□ -1.74
RNF144AP50876 RNA5SP87-201ENST00000384155 118 ntBASIC4.19□□□□□ -1.74
RNF144AP50876 MIR548B-201ENST00000385247 97 ntBASIC4.19□□□□□ -1.74
RNF144AP50876 Y_RNA.587-201ENST00000391210 103 ntBASIC4.19□□□□□ -1.74
RNF144AP50876 RN7SKP216-201ENST00000411050 312 ntBASIC4.19□□□□□ -1.74
RNF144AP50876 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.19□□□□□ -1.74
RNF144AP50876 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF144AP50876 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF144AP50876 AL031737.1-201ENST00000450125 223 ntBASIC4.19□□□□□ -1.74
RNF144AP50876 RNU6-537P-201ENST00000517277 103 ntBASIC4.19□□□□□ -1.74
RNF144AP50876 AC100770.1-201ENST00000532310 322 ntBASIC4.19□□□□□ -1.74
RNF144AP50876 AL160290.3-201ENST00000604869 165 ntBASIC4.19□□□□□ -1.74
RNF144AP50876 AC039056.2-201ENST00000622261 511 ntBASIC4.19□□□□□ -1.74
RNF144AP50876 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.19□□□□□ -1.74
RNF144AP50876 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
RNF144AP50876 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RNF144AP50876 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF144AP50876 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF144AP50876 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RNF144AP50876 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF144AP50876 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RNF144AP50876 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF144AP50876 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RNF144AP50876 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF144AP50876 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF144AP50876 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF144AP50876 RNU4-15P-201ENST00000362613 141 ntBASIC4.18□□□□□ -1.74
RNF144AP50876 RNU1-63P-201ENST00000383902 164 ntBASIC4.18□□□□□ -1.74
RNF144AP50876 SNORA67.2-201ENST00000384300 149 ntBASIC4.18□□□□□ -1.74
RNF144AP50876 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF144AP50876 MIR298-201ENST00000401212 88 ntBASIC4.18□□□□□ -1.74
RNF144AP50876 Z98745.1-201ENST00000402553 494 ntBASIC4.18□□□□□ -1.74
RNF144AP50876 MIR1302-4-201ENST00000408701 150 ntBASIC4.18□□□□□ -1.74
RNF144AP50876 VDAC1P3-201ENST00000434069 851 ntBASIC4.18□□□□□ -1.74
RNF144AP50876 RPS29P24-201ENST00000486345 171 ntBASIC4.18□□□□□ -1.74
RNF144AP50876 AC145146.1-201ENST00000496370 254 ntBASIC4.18□□□□□ -1.74
RNF144AP50876 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.18□□□□□ -1.74
RNF144AP50876 TOMM20P2-201ENST00000540082 421 ntBASIC4.18□□□□□ -1.74
RNF144AP50876 AC091178.1-203ENST00000584586 279 ntBASIC4.18□□□□□ -1.74
RNF144AP50876 AC004832.5-201ENST00000608677 401 ntBASIC4.18□□□□□ -1.74
RNF144AP50876 snoZ196.1-201ENST00000625269 89 ntBASIC4.18□□□□□ -1.74
RNF144AP50876 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RNF144AP50876 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
RNF144AP50876 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms