Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 USP9YP8-201ENST00000441913 500 ntBASIC2.31□□□□□ -2.04
LHX1P48742 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.31□□□□□ -2.04
LHX1P48742 RNU6-1037P-201ENST00000459571 107 ntBASIC2.31□□□□□ -2.04
LHX1P48742 AC007547.1-201ENST00000462177 490 ntBASIC2.31□□□□□ -2.04
LHX1P48742 MTCYBP18-201ENST00000501056 747 ntBASIC2.31□□□□□ -2.04
LHX1P48742 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.31□□□□□ -2.04
LHX1P48742 RNA5SP82-201ENST00000516707 92 ntBASIC2.31□□□□□ -2.04
LHX1P48742 RNA5SP402-201ENST00000517148 110 ntBASIC2.31□□□□□ -2.04
LHX1P48742 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.31□□□□□ -2.04
LHX1P48742 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.31□□□□□ -2.04
LHX1P48742 AP003465.2-201ENST00000602571 373 ntBASIC2.31□□□□□ -2.04
LHX1P48742 AL355297.2-201ENST00000604792 129 ntBASIC2.31□□□□□ -2.04
LHX1P48742 ELOCP5-201ENST00000604924 333 ntBASIC2.31□□□□□ -2.04
LHX1P48742 CTHRC1P1-201ENST00000605383 469 ntBASIC2.31□□□□□ -2.04
LHX1P48742 AC064836.2-201ENST00000609491 462 ntBASIC2.31□□□□□ -2.04
LHX1P48742 FAM157A-202ENST00000615155 405 ntBASIC2.31□□□□□ -2.04
LHX1P48742 AC008121.3-201ENST00000618726 433 ntBASIC2.31□□□□□ -2.04
LHX1P48742 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.31□□□□□ -2.04
LHX1P48742 AL160394.1-201ENST00000624765 724 ntBASIC2.31□□□□□ -2.04
LHX1P48742 MIR219B-201ENST00000637023 88 ntBASIC2.31□□□□□ -2.04
LHX1P48742 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.31□□□□□ -2.04
LHX1P48742 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.31□□□□□ -2.04
LHX1P48742 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
LHX1P48742 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
LHX1P48742 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.31□□□□□ -2.04
LHX1P48742 RNU6-254P-201ENST00000363377 107 ntBASIC2.3□□□□□ -2.04
LHX1P48742 RNU6-1032P-201ENST00000384100 107 ntBASIC2.3□□□□□ -2.04
LHX1P48742 CBX3P9-201ENST00000402326 552 ntBASIC2.3□□□□□ -2.04
LHX1P48742 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.3□□□□□ -2.04
LHX1P48742 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.3□□□□□ -2.04
LHX1P48742 AC009161.1-201ENST00000417306 376 ntBASIC2.3□□□□□ -2.04
LHX1P48742 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.3□□□□□ -2.04
LHX1P48742 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.3□□□□□ -2.04
LHX1P48742 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.3□□□□□ -2.04
LHX1P48742 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.3□□□□□ -2.04
LHX1P48742 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.3□□□□□ -2.04
LHX1P48742 RPS29P25-201ENST00000481709 171 ntBASIC2.3□□□□□ -2.04
LHX1P48742 RPL30P1-201ENST00000488676 339 ntBASIC2.3□□□□□ -2.04
LHX1P48742 TRBVA-201ENST00000498804 316 ntBASIC2.3□□□□□ -2.04
LHX1P48742 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.3□□□□□ -2.04
LHX1P48742 MTND4LP26-201ENST00000518144 282 ntBASIC2.3□□□□□ -2.04
LHX1P48742 AC115990.1-201ENST00000526957 301 ntBASIC2.3□□□□□ -2.04
LHX1P48742 CBX3P7-201ENST00000532876 502 ntBASIC2.3□□□□□ -2.04
LHX1P48742 AC092794.1-201ENST00000612734 582 ntBASIC2.3□□□□□ -2.04
LHX1P48742 AC090617.10-201ENST00000624308 134 ntBASIC2.3□□□□□ -2.04
LHX1P48742 AC090517.3-201ENST00000625170 141 ntBASIC2.3□□□□□ -2.04
LHX1P48742 AC100810.6-201ENST00000638068 285 ntBASIC2.3□□□□□ -2.04
LHX1P48742 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LHX1P48742 AC092881.1-201ENST00000638218 2733 ntBASIC2.29□□□□□ -2.04
LHX1P48742 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
LHX1P48742 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.29□□□□□ -2.04
LHX1P48742 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LHX1P48742 RNU6-1252P-201ENST00000363054 104 ntBASIC2.29□□□□□ -2.04
LHX1P48742 Y_RNA.157-201ENST00000363638 102 ntBASIC2.29□□□□□ -2.04
LHX1P48742 RNU6-1141P-201ENST00000364520 107 ntBASIC2.29□□□□□ -2.04
LHX1P48742 RNU6-43P-201ENST00000384302 107 ntBASIC2.29□□□□□ -2.04
LHX1P48742 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.29□□□□□ -2.04
LHX1P48742 UBE2V1P4-201ENST00000425374 344 ntBASIC2.29□□□□□ -2.04
LHX1P48742 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.29□□□□□ -2.04
LHX1P48742 AL513124.1-201ENST00000450410 614 ntBASIC2.29□□□□□ -2.04
LHX1P48742 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.29□□□□□ -2.04
LHX1P48742 FAM206BP-201ENST00000510179 541 ntBASIC2.29□□□□□ -2.04
LHX1P48742 AC092436.3-201ENST00000511788 257 ntBASIC2.29□□□□□ -2.04
LHX1P48742 RPL39P5-202ENST00000512505 151 ntBASIC2.29□□□□□ -2.04
LHX1P48742 RNU6-586P-201ENST00000517265 104 ntBASIC2.29□□□□□ -2.04
LHX1P48742 HSPE1P18-201ENST00000517602 280 ntBASIC2.29□□□□□ -2.04
LHX1P48742 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.29□□□□□ -2.04
LHX1P48742 MYL12BP1-201ENST00000569826 507 ntBASIC2.29□□□□□ -2.04
LHX1P48742 AC100830.2-201ENST00000581636 240 ntBASIC2.29□□□□□ -2.04
LHX1P48742 AC116312.1-201ENST00000606841 314 ntBASIC2.29□□□□□ -2.04
LHX1P48742 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.29□□□□□ -2.04
LHX1P48742 AC002553.4-201ENST00000616896 331 ntBASIC2.29□□□□□ -2.04
LHX1P48742 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LHX1P48742 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.29□□□□□ -2.04
LHX1P48742 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LHX1P48742 MIRLET7G-201ENST00000362280 84 ntBASIC2.28□□□□□ -2.04
LHX1P48742 RNU6-1285P-201ENST00000363480 105 ntBASIC2.28□□□□□ -2.04
LHX1P48742 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LHX1P48742 RN7SKP32-201ENST00000410167 303 ntBASIC2.28□□□□□ -2.04
LHX1P48742 RN7SKP284-201ENST00000411002 343 ntBASIC2.28□□□□□ -2.04
LHX1P48742 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.28□□□□□ -2.04
LHX1P48742 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.28□□□□□ -2.04
LHX1P48742 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.28□□□□□ -2.04
LHX1P48742 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.28□□□□□ -2.04
LHX1P48742 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.28□□□□□ -2.04
LHX1P48742 RNU1-104P-201ENST00000517280 175 ntBASIC2.28□□□□□ -2.04
LHX1P48742 AP005902.1-201ENST00000521358 186 ntBASIC2.28□□□□□ -2.04
LHX1P48742 AP003033.1-201ENST00000527244 415 ntBASIC2.28□□□□□ -2.04
LHX1P48742 AC026371.1-201ENST00000551867 419 ntBASIC2.28□□□□□ -2.04
LHX1P48742 IMMP1LP2-201ENST00000552954 492 ntBASIC2.28□□□□□ -2.04
LHX1P48742 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.28□□□□□ -2.04
LHX1P48742 AP001836.1-201ENST00000604675 523 ntBASIC2.28□□□□□ -2.04
LHX1P48742 AL356157.2-201ENST00000605122 111 ntBASIC2.28□□□□□ -2.04
LHX1P48742 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
LHX1P48742 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.27□□□□□ -2.05
LHX1P48742 MTND4P23-201ENST00000447723 1363 ntBASIC2.27□□□□□ -2.05
LHX1P48742 snoU2_19.1-201ENST00000362361 80 ntBASIC2.27□□□□□ -2.05
LHX1P48742 SNORA67.1-201ENST00000364749 141 ntBASIC2.27□□□□□ -2.05
LHX1P48742 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LHX1P48742 RNU6-128P-201ENST00000383976 107 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms