Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.11□□□□□ -2.07
CDX1P47902 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.11□□□□□ -2.07
CDX1P47902 AC022202.1-201ENST00000613515 211 ntBASIC2.11□□□□□ -2.07
CDX1P47902 AC100810.6-201ENST00000638068 285 ntBASIC2.11□□□□□ -2.07
CDX1P47902 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
CDX1P47902 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CDX1P47902 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.1□□□□□ -2.07
CDX1P47902 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
CDX1P47902 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CDX1P47902 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.1□□□□□ -2.07
CDX1P47902 RNU6-743P-201ENST00000364151 106 ntBASIC2.1□□□□□ -2.07
CDX1P47902 U3.12-201ENST00000364498 214 ntBASIC2.1□□□□□ -2.07
CDX1P47902 EIF1P1-201ENST00000421436 341 ntBASIC2.1□□□□□ -2.07
CDX1P47902 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.1□□□□□ -2.07
CDX1P47902 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.1□□□□□ -2.07
CDX1P47902 AL109933.2-201ENST00000452651 260 ntBASIC2.1□□□□□ -2.07
CDX1P47902 AC003982.1-202ENST00000469928 248 ntBASIC2.1□□□□□ -2.07
CDX1P47902 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX1P47902 AC087241.2-201ENST00000535801 324 ntBASIC2.1□□□□□ -2.07
CDX1P47902 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX1P47902 SCOCP1-201ENST00000554676 349 ntBASIC2.1□□□□□ -2.07
CDX1P47902 AL031274.2-201ENST00000599419 203 ntBASIC2.1□□□□□ -2.07
CDX1P47902 AC078795.3-201ENST00000602913 472 ntBASIC2.1□□□□□ -2.07
CDX1P47902 AP000907.4-201ENST00000604143 237 ntBASIC2.1□□□□□ -2.07
CDX1P47902 AC092608.2-201ENST00000624427 218 ntBASIC2.1□□□□□ -2.07
CDX1P47902 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDX1P47902 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDX1P47902 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDX1P47902 MIR1294-201ENST00000408503 142 ntBASIC2.09□□□□□ -2.07
CDX1P47902 RNA5SP118-201ENST00000410385 109 ntBASIC2.09□□□□□ -2.07
CDX1P47902 RNU6-325P-201ENST00000411132 105 ntBASIC2.09□□□□□ -2.07
CDX1P47902 AL030996.1-201ENST00000411430 235 ntBASIC2.09□□□□□ -2.07
CDX1P47902 ZNF885P-201ENST00000420174 1098 ntBASIC2.09□□□□□ -2.07
CDX1P47902 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.09□□□□□ -2.07
CDX1P47902 IFNA20P-201ENST00000436840 528 ntBASIC2.09□□□□□ -2.07
CDX1P47902 AC011753.1-201ENST00000451001 220 ntBASIC2.09□□□□□ -2.07
CDX1P47902 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.09□□□□□ -2.07
CDX1P47902 UBE2DNL-203ENST00000474922 222 ntBASIC2.09□□□□□ -2.07
CDX1P47902 MTCO1P29-201ENST00000496868 288 ntBASIC2.09□□□□□ -2.07
CDX1P47902 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.09□□□□□ -2.07
CDX1P47902 AC096745.1-201ENST00000509945 370 ntBASIC2.09□□□□□ -2.07
CDX1P47902 FAM206BP-201ENST00000510179 541 ntBASIC2.09□□□□□ -2.07
CDX1P47902 AC011352.1-201ENST00000512300 793 ntBASIC2.09□□□□□ -2.07
CDX1P47902 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.09□□□□□ -2.07
CDX1P47902 RNU7-193P-201ENST00000516723 65 ntBASIC2.09□□□□□ -2.07
CDX1P47902 RNU6-567P-201ENST00000516746 107 ntBASIC2.09□□□□□ -2.07
CDX1P47902 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.09□□□□□ -2.07
CDX1P47902 AC107953.1-201ENST00000522216 297 ntBASIC2.09□□□□□ -2.07
CDX1P47902 NDUFA5P6-201ENST00000542110 379 ntBASIC2.09□□□□□ -2.07
CDX1P47902 AC021231.3-201ENST00000558497 370 ntBASIC2.09□□□□□ -2.07
CDX1P47902 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.09□□□□□ -2.07
CDX1P47902 RPS3AP23-202ENST00000574601 686 ntBASIC2.09□□□□□ -2.07
CDX1P47902 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.09□□□□□ -2.07
CDX1P47902 AC080078.2-201ENST00000603766 501 ntBASIC2.09□□□□□ -2.07
CDX1P47902 SNRPGP17-201ENST00000603780 214 ntBASIC2.09□□□□□ -2.07
CDX1P47902 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CDX1P47902 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CDX1P47902 RNU6-611P-201ENST00000384276 104 ntBASIC2.08□□□□□ -2.08
CDX1P47902 MIR521-1-201ENST00000384902 87 ntBASIC2.08□□□□□ -2.08
CDX1P47902 RNU2-52P-201ENST00000410680 190 ntBASIC2.08□□□□□ -2.08
CDX1P47902 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.08□□□□□ -2.08
CDX1P47902 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.08□□□□□ -2.08
CDX1P47902 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.08□□□□□ -2.08
CDX1P47902 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.08□□□□□ -2.08
CDX1P47902 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.08□□□□□ -2.08
CDX1P47902 ARL5AP4-201ENST00000430731 512 ntBASIC2.08□□□□□ -2.08
CDX1P47902 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.08□□□□□ -2.08
CDX1P47902 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CDX1P47902 AL137159.1-201ENST00000452808 512 ntBASIC2.08□□□□□ -2.08
CDX1P47902 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.08□□□□□ -2.08
CDX1P47902 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.08□□□□□ -2.08
CDX1P47902 MTCYBP18-201ENST00000501056 747 ntBASIC2.08□□□□□ -2.08
CDX1P47902 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.08□□□□□ -2.08
CDX1P47902 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.08□□□□□ -2.08
CDX1P47902 AC018630.3-201ENST00000542637 96 ntBASIC2.08□□□□□ -2.08
CDX1P47902 AC109446.1-201ENST00000566172 220 ntBASIC2.08□□□□□ -2.08
CDX1P47902 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.08□□□□□ -2.08
CDX1P47902 AC009127.3-201ENST00000570531 403 ntBASIC2.08□□□□□ -2.08
CDX1P47902 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.08□□□□□ -2.08
CDX1P47902 MIR4672-201ENST00000583126 81 ntBASIC2.08□□□□□ -2.08
CDX1P47902 AC093913.1-201ENST00000614178 329 ntBASIC2.08□□□□□ -2.08
CDX1P47902 AC012640.5-201ENST00000623897 319 ntBASIC2.08□□□□□ -2.08
CDX1P47902 AC090617.10-201ENST00000624308 134 ntBASIC2.08□□□□□ -2.08
CDX1P47902 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CDX1P47902 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
CDX1P47902 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CDX1P47902 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDX1P47902 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.07□□□□□ -2.08
CDX1P47902 Y_RNA.157-201ENST00000363638 102 ntBASIC2.07□□□□□ -2.08
CDX1P47902 Y_RNA.414-201ENST00000384011 101 ntBASIC2.07□□□□□ -2.08
CDX1P47902 RNU6-790P-201ENST00000384479 105 ntBASIC2.07□□□□□ -2.08
CDX1P47902 RNA5SP210-201ENST00000391034 120 ntBASIC2.07□□□□□ -2.08
CDX1P47902 SNORA12-201ENST00000391162 147 ntBASIC2.07□□□□□ -2.08
CDX1P47902 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDX1P47902 SNORD23.1-201ENST00000408212 104 ntBASIC2.07□□□□□ -2.08
CDX1P47902 MIR1277-201ENST00000408536 78 ntBASIC2.07□□□□□ -2.08
CDX1P47902 RNU2-48P-201ENST00000410694 191 ntBASIC2.07□□□□□ -2.08
CDX1P47902 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.07□□□□□ -2.08
CDX1P47902 EIF1AXP1-201ENST00000419267 435 ntBASIC2.07□□□□□ -2.08
CDX1P47902 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms