Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RNU7-182P-201ENST00000459009 62 ntBASIC1.85□□□□□ -2.11
RFC4P35249 RPL30P12-201ENST00000474666 353 ntBASIC1.85□□□□□ -2.11
RFC4P35249 MTCO3P9-201ENST00000506989 781 ntBASIC1.85□□□□□ -2.11
RFC4P35249 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.85□□□□□ -2.11
RFC4P35249 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.85□□□□□ -2.11
RFC4P35249 Y_RNA.695-201ENST00000516715 107 ntBASIC1.85□□□□□ -2.11
RFC4P35249 RNA5SP503-201ENST00000517047 117 ntBASIC1.85□□□□□ -2.11
RFC4P35249 AP003072.2-201ENST00000527756 676 ntBASIC1.85□□□□□ -2.11
RFC4P35249 HSBP1P1-201ENST00000555205 166 ntBASIC1.85□□□□□ -2.11
RFC4P35249 AC093249.1-201ENST00000567049 203 ntBASIC1.85□□□□□ -2.11
RFC4P35249 AC136443.5-201ENST00000603741 370 ntBASIC1.85□□□□□ -2.11
RFC4P35249 AC006566.1-201ENST00000608943 513 ntBASIC1.85□□□□□ -2.11
RFC4P35249 uc_338.15-201ENST00000615470 191 ntBASIC1.85□□□□□ -2.11
RFC4P35249 RMST_2.1-201ENST00000617263 136 ntBASIC1.85□□□□□ -2.11
RFC4P35249 RMST_7.1-201ENST00000621935 268 ntBASIC1.85□□□□□ -2.11
RFC4P35249 SEPT14P19-203ENST00000633205 211 ntBASIC1.85□□□□□ -2.11
RFC4P35249 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RFC4P35249 RNU6-1010P-201ENST00000362757 107 ntBASIC1.84□□□□□ -2.11
RFC4P35249 RNU6-348P-201ENST00000384386 107 ntBASIC1.84□□□□□ -2.11
RFC4P35249 RNU6-607P-201ENST00000411283 108 ntBASIC1.84□□□□□ -2.11
RFC4P35249 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.84□□□□□ -2.11
RFC4P35249 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.84□□□□□ -2.11
RFC4P35249 CETN4P-201ENST00000432407 469 ntBASIC1.84□□□□□ -2.11
RFC4P35249 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.84□□□□□ -2.11
RFC4P35249 C1DP4-201ENST00000455429 424 ntBASIC1.84□□□□□ -2.11
RFC4P35249 AC087884.1-201ENST00000469738 328 ntBASIC1.84□□□□□ -2.11
RFC4P35249 AC018868.1-201ENST00000491307 315 ntBASIC1.84□□□□□ -2.11
RFC4P35249 AC074344.1-201ENST00000512823 224 ntBASIC1.84□□□□□ -2.11
RFC4P35249 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.84□□□□□ -2.11
RFC4P35249 SNORD27.1-201ENST00000516319 72 ntBASIC1.84□□□□□ -2.11
RFC4P35249 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.84□□□□□ -2.11
RFC4P35249 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.84□□□□□ -2.11
RFC4P35249 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.84□□□□□ -2.11
RFC4P35249 MIR4528-201ENST00000577763 90 ntBASIC1.84□□□□□ -2.11
RFC4P35249 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.84□□□□□ -2.11
RFC4P35249 AC119751.7-201ENST00000600494 245 ntBASIC1.84□□□□□ -2.11
RFC4P35249 AC068944.2-201ENST00000610373 403 ntBASIC1.84□□□□□ -2.11
RFC4P35249 MIR6078-201ENST00000611069 100 ntBASIC1.84□□□□□ -2.11
RFC4P35249 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.84□□□□□ -2.11
RFC4P35249 AL158063.1-201ENST00000615349 536 ntBASIC1.84□□□□□ -2.11
RFC4P35249 AC099842.1-201ENST00000619919 596 ntBASIC1.84□□□□□ -2.11
RFC4P35249 MIR6734-201ENST00000621166 68 ntBASIC1.84□□□□□ -2.11
RFC4P35249 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.84□□□□□ -2.11
RFC4P35249 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
RFC4P35249 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.84□□□□□ -2.12
RFC4P35249 AL390237.1-201ENST00000404226 1415 ntBASIC1.83□□□□□ -2.12
RFC4P35249 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RFC4P35249 SNORD115-3-201ENST00000363100 82 ntBASIC1.83□□□□□ -2.12
RFC4P35249 RNA5SP465-201ENST00000391195 109 ntBASIC1.83□□□□□ -2.12
RFC4P35249 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.83□□□□□ -2.12
RFC4P35249 AL365400.1-201ENST00000431854 640 ntBASIC1.83□□□□□ -2.12
RFC4P35249 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.83□□□□□ -2.12
RFC4P35249 AL596276.1-201ENST00000434465 418 ntBASIC1.83□□□□□ -2.12
RFC4P35249 MTND4P32-201ENST00000437189 1237 ntBASIC1.83□□□□□ -2.12
RFC4P35249 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.83□□□□□ -2.12
RFC4P35249 RNU6-667P-201ENST00000517186 102 ntBASIC1.83□□□□□ -2.12
RFC4P35249 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.83□□□□□ -2.12
RFC4P35249 SUB1P2-201ENST00000556401 297 ntBASIC1.83□□□□□ -2.12
RFC4P35249 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.83□□□□□ -2.12
RFC4P35249 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.83□□□□□ -2.12
RFC4P35249 AC025449.1-201ENST00000603896 529 ntBASIC1.83□□□□□ -2.12
RFC4P35249 RMST_4.1-201ENST00000616886 107 ntBASIC1.83□□□□□ -2.12
RFC4P35249 AC136475.10-201ENST00000620253 385 ntBASIC1.83□□□□□ -2.12
RFC4P35249 Z69908.1-201ENST00000622603 247 ntBASIC1.83□□□□□ -2.12
RFC4P35249 AC097372.5-201ENST00000623665 376 ntBASIC1.83□□□□□ -2.12
RFC4P35249 AC090517.3-201ENST00000625170 141 ntBASIC1.83□□□□□ -2.12
RFC4P35249 RNU6-212P-201ENST00000362642 104 ntBASIC1.82□□□□□ -2.12
RFC4P35249 RNU6-78P-201ENST00000362897 107 ntBASIC1.82□□□□□ -2.12
RFC4P35249 RNU4-48P-201ENST00000365559 182 ntBASIC1.82□□□□□ -2.12
RFC4P35249 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.82□□□□□ -2.12
RFC4P35249 AL669831.1-202ENST00000428504 417 ntBASIC1.82□□□□□ -2.12
RFC4P35249 MTATP6P17-201ENST00000431030 672 ntBASIC1.82□□□□□ -2.12
RFC4P35249 MTCO2P11-201ENST00000431069 680 ntBASIC1.82□□□□□ -2.12
RFC4P35249 GTF2IP13-201ENST00000438487 386 ntBASIC1.82□□□□□ -2.12
RFC4P35249 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.82□□□□□ -2.12
RFC4P35249 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.82□□□□□ -2.12
RFC4P35249 AC104136.1-201ENST00000512969 394 ntBASIC1.82□□□□□ -2.12
RFC4P35249 RNU6-430P-201ENST00000517078 107 ntBASIC1.82□□□□□ -2.12
RFC4P35249 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.82□□□□□ -2.12
RFC4P35249 AC090897.2-201ENST00000581715 130 ntBASIC1.82□□□□□ -2.12
RFC4P35249 MIR4713-201ENST00000582691 75 ntBASIC1.82□□□□□ -2.12
RFC4P35249 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.82□□□□□ -2.12
RFC4P35249 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.82□□□□□ -2.12
RFC4P35249 AC008945.2-201ENST00000606056 604 ntBASIC1.82□□□□□ -2.12
RFC4P35249 AC072046.2-201ENST00000618366 268 ntBASIC1.82□□□□□ -2.12
RFC4P35249 U1.36-201ENST00000620684 176 ntBASIC1.82□□□□□ -2.12
RFC4P35249 AC022079.1-201ENST00000621546 602 ntBASIC1.82□□□□□ -2.12
RFC4P35249 AC009161.2-201ENST00000624626 138 ntBASIC1.82□□□□□ -2.12
RFC4P35249 MIR3974-201ENST00000637126 96 ntBASIC1.82□□□□□ -2.12
RFC4P35249 HAUS6P2-201ENST00000433254 2404 ntBASIC1.81□□□□□ -2.12
RFC4P35249 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RFC4P35249 RNU6-37P-201ENST00000362692 107 ntBASIC1.81□□□□□ -2.12
RFC4P35249 RNU6-11P-201ENST00000364234 107 ntBASIC1.81□□□□□ -2.12
RFC4P35249 Y_RNA.324-201ENST00000365165 102 ntBASIC1.81□□□□□ -2.12
RFC4P35249 RNU6-25P-201ENST00000383873 107 ntBASIC1.81□□□□□ -2.12
RFC4P35249 RNU6-48P-201ENST00000384161 107 ntBASIC1.81□□□□□ -2.12
RFC4P35249 RNU6-16P-201ENST00000384385 107 ntBASIC1.81□□□□□ -2.12
RFC4P35249 RNU6-15P-201ENST00000384534 107 ntBASIC1.81□□□□□ -2.12
RFC4P35249 RNU6-29P-201ENST00000384637 107 ntBASIC1.81□□□□□ -2.12
RFC4P35249 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms