Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 MIR892C-201ENST00000516410 77 ntBASIC2.61□□□□□ -1.99
HOXC8P31273 RNU6-1332P-201ENST00000516666 104 ntBASIC2.61□□□□□ -1.99
HOXC8P31273 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.61□□□□□ -1.99
HOXC8P31273 CYCSP27-201ENST00000527643 293 ntBASIC2.61□□□□□ -1.99
HOXC8P31273 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC8P31273 AC025423.5-201ENST00000550230 219 ntBASIC2.61□□□□□ -1.99
HOXC8P31273 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.61□□□□□ -1.99
HOXC8P31273 AL355375.2-201ENST00000574825 175 ntBASIC2.61□□□□□ -1.99
HOXC8P31273 AC009163.5-201ENST00000575421 637 ntBASIC2.61□□□□□ -1.99
HOXC8P31273 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.61□□□□□ -1.99
HOXC8P31273 LRRC37A5P-203ENST00000580181 585 ntBASIC2.61□□□□□ -1.99
HOXC8P31273 AC105245.1-201ENST00000581934 244 ntBASIC2.61□□□□□ -1.99
HOXC8P31273 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC8P31273 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXC8P31273 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC8P31273 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.61□□□□□ -1.99
HOXC8P31273 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC8P31273 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC8P31273 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC8P31273 Y_RNA.212-201ENST00000364177 102 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 MIR548F5-201ENST00000408421 86 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 AC138623.1-201ENST00000418060 216 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 PGBD4P6-201ENST00000421501 610 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 DPH3P2-201ENST00000422618 250 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 UBE2V1P7-201ENST00000446395 340 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 AC112771.1-201ENST00000463581 102 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 AC090096.1-201ENST00000489168 390 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 RNU5B-3P-201ENST00000516601 115 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 Y_RNA.691-201ENST00000516611 103 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC8P31273 AP004607.1-201ENST00000524456 203 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 MIR4790-201ENST00000577799 79 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 MIR5571-201ENST00000577998 113 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 AC138627.2-201ENST00000624202 601 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 MIR3529-201ENST00000637713 78 ntBASIC2.6□□□□□ -1.99
HOXC8P31273 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
HOXC8P31273 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC8P31273 OR56A5-201ENST00000340110 738 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 Y_RNA.67-201ENST00000362870 100 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 RNU6-384P-201ENST00000364900 104 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 Y_RNA.324-201ENST00000365165 102 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 Y_RNA.474-201ENST00000384341 102 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 MIR504-201ENST00000385065 83 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 FTH1P15-201ENST00000406984 280 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.59□□□□□ -1.99
HOXC8P31273 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 AC096638.1-201ENST00000444678 216 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 AL353705.4-201ENST00000449661 238 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 GSTA11P-201ENST00000452866 669 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 AC011005.2-201ENST00000487324 359 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 RNU6-237P-201ENST00000515985 71 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 RNU6-566P-201ENST00000516790 107 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 COPS8P3-201ENST00000526024 482 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 AP005639.2-201ENST00000527592 928 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 SNRPGP18-201ENST00000553000 214 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.59□□□□□ -1.99
HOXC8P31273 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.59□□□□□ -1.99
HOXC8P31273 AC023043.2-201ENST00000589678 1026 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 AL158827.2-201ENST00000602494 330 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 RNU6-85P-201ENST00000605989 107 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 AL138726.1-201ENST00000614873 333 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 RMST_4.1-201ENST00000616886 107 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 AC244517.12-201ENST00000623581 663 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 SCARNA4-202ENST00000625402 129 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXC8P31273 AL691447.3-201ENST00000635020 330 ntBASIC2.59□□□□□ -1.99
HOXC8P31273 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HOXC8P31273 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.58□□□□□ -2
HOXC8P31273 SNORD14B-201ENST00000364533 90 ntBASIC2.58□□□□□ -2
HOXC8P31273 SNORD116-11-201ENST00000383882 92 ntBASIC2.58□□□□□ -2
HOXC8P31273 Y_RNA.535-201ENST00000384612 99 ntBASIC2.58□□□□□ -2
HOXC8P31273 SNORD73A-201ENST00000386062 65 ntBASIC2.58□□□□□ -2
HOXC8P31273 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
HOXC8P31273 AL133475.1-201ENST00000404414 305 ntBASIC2.58□□□□□ -2
HOXC8P31273 RNU2-63P-201ENST00000410792 194 ntBASIC2.58□□□□□ -2
HOXC8P31273 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.58□□□□□ -2
HOXC8P31273 NCOR1P3-201ENST00000420479 303 ntBASIC2.58□□□□□ -2
HOXC8P31273 AL590632.1-201ENST00000424289 371 ntBASIC2.58□□□□□ -2
HOXC8P31273 SUMO1P4-201ENST00000429430 302 ntBASIC2.58□□□□□ -2
HOXC8P31273 RPL23AP49-201ENST00000492925 468 ntBASIC2.58□□□□□ -2
HOXC8P31273 MTCO1P29-201ENST00000496868 288 ntBASIC2.58□□□□□ -2
HOXC8P31273 AC008526.1-201ENST00000509149 338 ntBASIC2.58□□□□□ -2
HOXC8P31273 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.58□□□□□ -2
HOXC8P31273 SNORA25.11-201ENST00000515935 105 ntBASIC2.58□□□□□ -2
HOXC8P31273 RNA5SP454-201ENST00000517231 127 ntBASIC2.58□□□□□ -2
HOXC8P31273 AC069113.1-201ENST00000517763 267 ntBASIC2.58□□□□□ -2
HOXC8P31273 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.58□□□□□ -2
HOXC8P31273 AC087854.1-201ENST00000519706 414 ntBASIC2.58□□□□□ -2
HOXC8P31273 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.58□□□□□ -2
HOXC8P31273 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.58□□□□□ -2
HOXC8P31273 POLR3GP2-201ENST00000588366 668 ntBASIC2.58□□□□□ -2
HOXC8P31273 APOOP1-201ENST00000604695 592 ntBASIC2.58□□□□□ -2
HOXC8P31273 AC123912.5-201ENST00000605470 343 ntBASIC2.58□□□□□ -2
HOXC8P31273 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.58□□□□□ -2
HOXC8P31273 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.58□□□□□ -2
HOXC8P31273 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.58□□□□□ -2
HOXC8P31273 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.58□□□□□ -2
HOXC8P31273 MIR7843-201ENST00000622274 79 ntBASIC2.58□□□□□ -2
HOXC8P31273 AC006026.1-201ENST00000444025 1803 ntBASIC2.58□□□□□ -2
HOXC8P31273 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms