Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC092608.2-201ENST00000624427 218 ntBASIC3.49□□□□□ -1.85
CNGA1P29973 IGHVIII-44-202ENST00000636235 289 ntBASIC3.49□□□□□ -1.85
CNGA1P29973 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
CNGA1P29973 AC008264.2-201ENST00000610193 3731 ntBASIC3.49□□□□□ -1.85
CNGA1P29973 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CNGA1P29973 ZNF299P-201ENST00000406845 1804 ntBASIC3.49□□□□□ -1.85
CNGA1P29973 Y_RNA.146-201ENST00000363549 102 ntBASIC3.48□□□□□ -1.85
CNGA1P29973 RNU6-1286P-201ENST00000383871 107 ntBASIC3.48□□□□□ -1.85
CNGA1P29973 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CNGA1P29973 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.48□□□□□ -1.85
CNGA1P29973 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.48□□□□□ -1.85
CNGA1P29973 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.48□□□□□ -1.85
CNGA1P29973 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.48□□□□□ -1.85
CNGA1P29973 AL513124.1-201ENST00000450410 614 ntBASIC3.48□□□□□ -1.85
CNGA1P29973 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.48□□□□□ -1.85
CNGA1P29973 AC022447.4-201ENST00000504053 364 ntBASIC3.48□□□□□ -1.85
CNGA1P29973 SCGB1D5P-201ENST00000515134 247 ntBASIC3.48□□□□□ -1.85
CNGA1P29973 RNA5SP385-201ENST00000515947 110 ntBASIC3.48□□□□□ -1.85
CNGA1P29973 AC245166.1-201ENST00000521012 253 ntBASIC3.48□□□□□ -1.85
CNGA1P29973 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.48□□□□□ -1.85
CNGA1P29973 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.48□□□□□ -1.85
CNGA1P29973 AC103810.1-201ENST00000579873 453 ntBASIC3.48□□□□□ -1.85
CNGA1P29973 MIR3162-201ENST00000581818 82 ntBASIC3.48□□□□□ -1.85
CNGA1P29973 AC080078.3-201ENST00000605407 463 ntBASIC3.48□□□□□ -1.85
CNGA1P29973 AC005014.2-201ENST00000607795 599 ntBASIC3.48□□□□□ -1.85
CNGA1P29973 MIR6715A-201ENST00000615929 79 ntBASIC3.48□□□□□ -1.85
CNGA1P29973 AC091903.1-201ENST00000624322 454 ntBASIC3.48□□□□□ -1.85
CNGA1P29973 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CNGA1P29973 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CNGA1P29973 Y_RNA.48-201ENST00000362710 103 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 SNORD56.3-201ENST00000363507 71 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 Y_RNA.394-201ENST00000383942 103 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 RNU6-1040P-201ENST00000383974 107 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 RNU6-968P-201ENST00000384076 107 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 Y_RNA.504-201ENST00000384481 104 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 EIF4EP4-201ENST00000424916 578 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 AL139132.1-201ENST00000431587 344 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 GPM6BP3-201ENST00000442797 145 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 AL135938.1-201ENST00000443141 297 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 AL121594.1-201ENST00000475906 575 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 RPL30P1-201ENST00000488676 339 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 MRPS36P4-201ENST00000534436 298 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.47□□□□□ -1.85
CNGA1P29973 AC093249.1-201ENST00000567049 203 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 AL359198.2-201ENST00000611836 194 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 MIR7157-201ENST00000635801 60 ntBASIC3.47□□□□□ -1.85
CNGA1P29973 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.47□□□□□ -1.85
CNGA1P29973 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.47□□□□□ -1.85
CNGA1P29973 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CNGA1P29973 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CNGA1P29973 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CNGA1P29973 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CNGA1P29973 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.46□□□□□ -1.86
CNGA1P29973 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.46□□□□□ -1.86
CNGA1P29973 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.46□□□□□ -1.86
CNGA1P29973 OR56A5-201ENST00000340110 738 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 RNU6-1210P-201ENST00000363775 107 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 RNU6-595P-201ENST00000363944 107 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 U3.13-201ENST00000364804 214 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 SNORD42.2-201ENST00000365570 69 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 RNU6-142P-201ENST00000384019 107 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 RN7SKP123-201ENST00000410732 291 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 AC008267.5-201ENST00000424928 265 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 MTND1P14-201ENST00000427400 950 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.46□□□□□ -1.86
CNGA1P29973 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.46□□□□□ -1.86
CNGA1P29973 AC027575.1-201ENST00000481064 460 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.46□□□□□ -1.86
CNGA1P29973 AIG1P1-201ENST00000503376 148 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 RNU6-1170P-201ENST00000515974 106 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 RN7SKP132-201ENST00000516001 208 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 RNU5F-2P-201ENST00000516066 82 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 RNU1-143P-201ENST00000516296 146 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.46□□□□□ -1.86
CNGA1P29973 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.46□□□□□ -1.86
CNGA1P29973 AC007375.1-201ENST00000554513 578 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 MIR4319-201ENST00000577285 85 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CNGA1P29973 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 CYP2C61P-201ENST00000604072 290 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 U1.23-201ENST00000610293 146 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 RNU1-68P-201ENST00000615382 146 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 U1.39-201ENST00000621562 146 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CNGA1P29973 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.46□□□□□ -1.86
CNGA1P29973 AC138915.1-201ENST00000565427 1685 ntBASIC3.46□□□□□ -1.86
CNGA1P29973 AC233981.2-201ENST00000611524 1614 ntBASIC3.45□□□□□ -1.86
CNGA1P29973 RNU5B-2P-201ENST00000363036 113 ntBASIC3.45□□□□□ -1.86
CNGA1P29973 SNORA29-201ENST00000384183 140 ntBASIC3.45□□□□□ -1.86
CNGA1P29973 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.45□□□□□ -1.86
CNGA1P29973 AL139281.1-201ENST00000422120 335 ntBASIC3.45□□□□□ -1.86
CNGA1P29973 OOSP1P1-201ENST00000423265 274 ntBASIC3.45□□□□□ -1.86
CNGA1P29973 AC105272.1-201ENST00000438604 198 ntBASIC3.45□□□□□ -1.86
CNGA1P29973 RPS15AP7-201ENST00000439294 405 ntBASIC3.45□□□□□ -1.86
CNGA1P29973 Y_RNA.639-201ENST00000458981 102 ntBASIC3.45□□□□□ -1.86
CNGA1P29973 AC146507.2-201ENST00000460608 476 ntBASIC3.45□□□□□ -1.86
CNGA1P29973 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.45□□□□□ -1.86
CNGA1P29973 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.45□□□□□ -1.86
CNGA1P29973 SCARNA3-201ENST00000517097 143 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms