Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RNU7-170P-201ENST00000459303 61 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 SUMO2P6-201ENST00000505273 288 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 RNU6-138P-201ENST00000515952 107 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.24□□□□□ -1.89
COL11A2P13942 AL590705.4-201ENST00000532209 134 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL11A2P13942 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.24□□□□□ -1.89
COL11A2P13942 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL11A2P13942 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.24□□□□□ -1.89
COL11A2P13942 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
COL11A2P13942 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
COL11A2P13942 MAPK10-373ENST00000641983 6772 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.24□□□□□ -1.89
COL11A2P13942 RNU6-395P-201ENST00000365662 106 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 RNU6-629P-201ENST00000384061 103 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 SNORA19-201ENST00000384737 128 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 RNU6-882P-201ENST00000391025 103 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 RNU2-25P-201ENST00000411041 191 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.24□□□□□ -1.89
COL11A2P13942 RPS29P6-201ENST00000438196 145 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 AC104332.1-201ENST00000440471 797 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.24□□□□□ -1.89
COL11A2P13942 AC098869.1-201ENST00000481627 292 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.24□□□□□ -1.89
COL11A2P13942 RNU6-789P-201ENST00000517105 102 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 RNU6-111P-201ENST00000517179 105 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.24□□□□□ -1.89
COL11A2P13942 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.24□□□□□ -1.89
COL11A2P13942 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL11A2P13942 AC004792.1-201ENST00000614523 137 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 AC137590.2-201ENST00000619709 240 ntBASIC3.24□□□□□ -1.89
COL11A2P13942 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
COL11A2P13942 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL11A2P13942 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.23□□□□□ -1.89
COL11A2P13942 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL11A2P13942 MIR412-201ENST00000362142 91 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 Y_RNA.183-201ENST00000363882 113 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 RNU6-338P-201ENST00000383888 105 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 SNORD58.1-201ENST00000391313 66 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 RNU6-1203P-201ENST00000410703 110 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 SNORD56-201ENST00000413522 71 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 AC245291.1-201ENST00000419501 328 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL11A2P13942 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.23□□□□□ -1.89
COL11A2P13942 RN7SKP210-201ENST00000459176 261 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.23□□□□□ -1.89
COL11A2P13942 SNORA31.6-201ENST00000516241 130 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 RNU5B-3P-201ENST00000516601 115 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.23□□□□□ -1.89
COL11A2P13942 AC123912.5-201ENST00000605470 343 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 AC004852.3-201ENST00000614131 326 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 AC130454.1-201ENST00000622948 401 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 U2.22-201ENST00000636441 106 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 Z75746.1-201ENST00000440243 2080 ntBASIC3.23□□□□□ -1.89
COL11A2P13942 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL11A2P13942 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL11A2P13942 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.22□□□□□ -1.89
COL11A2P13942 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.22□□□□□ -1.89
COL11A2P13942 SNORD114-30-201ENST00000364448 72 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 SNORA40C-201ENST00000391285 128 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 AL033519.2-201ENST00000403958 392 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 MTCYBP2-201ENST00000407745 171 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 RNU6-1025P-201ENST00000410629 104 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 AP000275.1-201ENST00000411943 390 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.22□□□□□ -1.89
COL11A2P13942 RNU6-927P-201ENST00000516199 100 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 Y_RNA.713-201ENST00000517013 96 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 AC084851.1-201ENST00000529105 249 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 AL442163.3-201ENST00000554110 156 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
COL11A2P13942 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.22□□□□□ -1.89
COL11A2P13942 AC009314.1-201ENST00000603871 304 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 AC005046.1-201ENST00000608515 625 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.22□□□□□ -1.89
COL11A2P13942 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.22□□□□□ -1.89
COL11A2P13942 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL11A2P13942 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL11A2P13942 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL11A2P13942 Y_RNA.352-201ENST00000365439 102 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 RNU6-805P-201ENST00000365643 106 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 Y_RNA.416-201ENST00000384014 113 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 RNY3P4-201ENST00000384428 101 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 MIR628-201ENST00000385229 95 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 MIR1289-2-201ENST00000408360 111 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 RNU2-14P-201ENST00000411053 191 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.22□□□□□ -1.89
COL11A2P13942 TMEM167AP1-201ENST00000423409 219 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.22□□□□□ -1.89
COL11A2P13942 AL592045.1-201ENST00000429867 352 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 AC092423.1-201ENST00000430165 186 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 HMGN2P3-201ENST00000433603 273 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 CKS1BP5-201ENST00000434172 273 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 HMGN2P5-201ENST00000436882 273 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 AC013470.1-201ENST00000453438 462 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 RN7SL75P-201ENST00000461926 281 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 AC022868.1-201ENST00000517767 391 ntBASIC3.22□□□□□ -1.89
COL11A2P13942 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.22□□□□□ -1.89
COL11A2P13942 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms